KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458457
Entry
135458457         CDS       T09958                                 
Symbol
DCAF7
Name
(RefSeq) DDB1- and CUL4-associated factor 7
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    135458457 (DCAF7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zle04121]
    135458457 (DCAF7)
   03036 Chromosome and associated proteins [BR:zle03036]
    135458457 (DCAF7)
Ubiquitin system [BR:zle04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     135458457 (DCAF7)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     135458457 (DCAF7)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_EIPR1 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 MIOS_WD40 Beta-prop_EML_2 WDR55 EIF3I WD40_Gbeta Beta-prop_WDR41 WD_LRWD1 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 135458457
NCBI-ProteinID: XP_064589695
LinkDB
Position
27:4696040..4713511
AA seq 342 aa
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFI
CRNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFC
APLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtcgctgcacgggaagcggaaggagatctacaaatatgaggcgccctggaccgtgtac
gccatgaactggagcgtccggcccgacaagcggttccgcctggcgctggggagcttcgtg
gaggagtacaacaacaaggtgcagcttgttggtttggatgaagagagctcggaattcatt
tgcaggaacacctttgatcacccctaccccaccacaaagctgatgtggatcccagacacc
aagggagtctacccagacctgctggccaccagtggtgactacctgcgagtgtggagggtg
ggtgaaactgagacccggctggagtgtttgctgaacaacaacaagaactcggatttctgt
gctccactgacatcatttgactggaatgaagtggatccttacctgttaggtacctctagt
attgacacaacctgcactatttggggtctggagacaggacaggttctgggaagagtaaat
ttggtgtctggccacgtgaagacccagcttattgcacatgacaaagaggtgtacgacatc
gccttcagccgcgcgggcggcggcagggacatgttcgcctcggtgggcgccgatggctcg
gtcaggatgttcgacctgcggcacctggagcacagcaccatcatctacgaggacccccag
caccacccgctgctgcgcctctgctggaacaagcaggaccccaactacctggccaccatg
gccatggatggcatggaggttgtgattctagatgtcagagttccctgcacccctgttgcc
aggttaaacaaccacagagcatgtgtaaatggaattgcctgggcacctcactcttcctgc
cacatctgtacagcagcggatgatcaccaggctctcatctgggacatccagcagatgcct
cgtgccatcgaggaccccatcctggcctacacagccgagggagagatcaacaatgtacag
tgggcatccacccagccagactggatagccatctgctacaacaactgcctggagatcctc
agagtctaa

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