Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458766
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Entry
135458766 CDS
T09958
Symbol
HMG20B
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135458766 (HMG20B)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
135458766 (HMG20B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
FBF1
PI3K_P85_iSH2
WHAMM-JMY_N
DUF4763
Leu_zip
TIP49
Motif
Other DBs
NCBI-GeneID:
135458766
NCBI-ProteinID:
XP_064590144
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All DBs
Position
28:complement(860621..868039)
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AA seq
317 aa
AA seq
DB search
MAHSTKQPPAALLHATGKAQHGNFLVAIKQEKGESARVGGEKPEEEPVKKRGWPKGKKRK
KILPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEA
EREKQQYMKELREYQQSEAYKMCTEKIQEKKIKKEDVGTVGVNTLLNGHPHKAGECSDTF
STFDVPIFTEEFLDQNKAREAELRRLRKMNTEFEEQNAILQKHTESMNCAKEKLEQELVQ
EERQTLALQQQLQSVRQALTASFASLPIPGTGETPTLSTLDFYMAKLHSAIESNPLQHEP
LVLRVKEILSRIASEHL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcccacagcaccaagcagccgcctgccgccctgctacacgccacgggcaaggctcag
catgggaacttcctggtggccatcaaacaggagaagggggagtcggcccgggtgggtggt
gagaagccagaggaggagccggtgaagaagaggggctggcccaagggcaagaagaggaag
aagatccttcccaatggccccaaagcccccgtgacgggctatgtgcgcttcctgaacgag
cggcgcgagcagatccgcacacagcaccccgacctgcccttcccagagatcacaaagatg
ctgggagcagagtggagcaaactgcagctctctgagaagcagcggtacctggacgaggca
gagcgggagaagcagcagtacatgaaggagctgcgggagtaccagcagtcagaggcctac
aaaatgtgcacggagaagatccaggagaaaaagatcaaaaaagaggacgtgggcacggtg
ggtgtgaacaccctactcaacgggcacccgcacaaggctggtgagtgcagcgacaccttc
tccaccttcgatgtgcccatcttcaccgaggagttcttggaccaaaacaaggcccgggag
gccgagctgcggcgcctgcgcaagatgaacacggagtttgaggagcagaacgccatcctg
cagaagcacactgagagcatgaactgcgccaaggagaagctggagcaggagctggtgcag
gaggagaggcagaccctggccctgcagcagcagctccagtctgtgcgacaggccctcact
gccagcttcgcctccctccccatccccggcactggggagacccccacgctgagcaccctg
gacttctacatggccaaactgcacagtgccatcgagagcaaccccctgcagcacgagccg
ctggtgctgcgtgtcaaggagatcttgtccaggattgccagtgaacacttgtga
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