Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458775
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Entry
135458775 CDS
T09958
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135458775 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135458775 (REXO1)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
Pre-60S particles
RNases
135458775 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
TIL
Motif
Other DBs
NCBI-GeneID:
135458775
NCBI-ProteinID:
XP_064590165
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All DBs
Position
28:complement(1368030..1422675)
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AA seq
1230 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLPLG
RGAERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISNTPVSAAGPQSDSFASLEYNPGSYNFNNNSDYNPTPLAAA
ARSSKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKGTTKGSKRDRASDYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASG
SSPSKAGSESESNESSSKEQSTKLEGSASQGSKEAAQHKEDLPNSQKNLAKNSSDKNSKA
AKLCSGKNNKEIENKNKDSKDKTKKKKIDVSKAAGLSEAGKKEKNKNADKDKVLKKEEKL
KTKNEEKNCKDKSVKVKTDGNLKKPEKHKSEKVDGCKKEKSKSSSSSSGKSKSEGVTKGT
EKVGSSKKDPQSKTADVKNGKESSGRKNKEKGTKSSLERKKDKVTCAGQGDPKKGQKQQS
LSHVDLFGDESGDEDDRGRPLSSSLLDVSSDLDGADSGSASDSDRDRTKKAKRSKLSKSS
SSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKT
EDNLTTLFPGQKRRISHLVKQGNAETPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLVG
AAQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKAAVGGRSVTPSNDSEASTLPLKPC
TLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLK
FCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKKVV
SHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEK
AGRAVLYTAEEKKVTDSSCRICCRCGTEYMVSASGSCIRREECVHHWGRLRKQRVPGGWE
THYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTK
QGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLN
MFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQD
NVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctcaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccatttccgccaccccccggtggcc
ccggcgccgtgcggagcctccggagcctcaggcgaccccagcgtggggctcccgctcgga
cgcggcgcagagcgaggctatgatccctacaaccctgagctgcccaggccctccctggag
gtggaggatggctttctggctgacatcacagatgtcacccctggaattctggagctggag
ctggtcaacaaggccattgaggcagtgaagaacgaagtggagagggagcagaagaagtac
gaggagctgctggaaaccacgaaggagtttggtgcttcagagggctcctcactcatttca
aacacacctgtgtcagctgctgggcctcagagtgattcctttgcctccttggagtacaat
ccagggagctacaacttcaacaacaactcagactacaaccccactcctctggctgctgct
gcccgctccagtaaatacactttggattcctcccgctccaagggcagctcgctggagtac
gtccccaaggctgtggtgcagaataaaaaatacagcagcactgtcaccaacaacaaatat
gtgattgatgactccaagccttccacagacttggaatatgaccccctttccaattactct
gccaggctgttgggcaaaggcacaaccaaggggtccaaaagggacagagcctctgattat
gaggattcctactctccatcaaggaagaagctctgtgaagatcctgatgatgatgaggtg
ttggccaggttctcctcctctgaagatgaggctgaggtggaatataaaacagcttctggt
agttcaccctccaaagctggttcagagagtgagtcaaatgagtcctccagcaaagagcag
agcacaaaattggaaggctctgcttcccaggggagcaaagaagcagcacagcacaaggag
gaccttccaaattcacagaaaaaccttgccaagaactcatcagacaagaactcaaaggca
gcaaagttgtgttctggtaagaacaacaaggaaattgaaaataaaaacaaagactccaaa
gacaaaacaaaaaagaagaaaattgatgttagtaaagcagcaggcctcagtgaggctggg
aagaaggagaaaaataaaaatgcagacaaagacaaagtgctcaagaaagaagaaaaatta
aaaactaagaatgaagagaaaaactgcaaagacaaaagcgtcaaagtgaaaacagatggg
aacttgaaaaaacctgaaaaacacaagtcagaaaaggtggatgggtgtaagaaagaaaaa
tccaagtccagcagcagcagttcagggaaaagcaagagcgagggtgtcaccaagggcaca
gagaaagtggggagcagcaagaaggatcctcagagcaaaactgctgatgtgaaaaatggc
aaggaaagctctggtcgaaaaaacaaggagaaagggaccaagagctccctggagagaaag
aaggacaaggtcacttgtgcaggacaaggagaccccaagaagggtcagaagcagcagagt
ttgagtcacgtggacctgtttggggatgagagtggagatgaggatgacagaggccggcct
ttgtcctcctcactgcttgatgtgagctcagacttggatggggctgactctggctcagcc
tctgacagtgacagggacaggacaaagaaagcaaagcgctccaagctgtccaagtcctca
tcatcctcctctacatctgatgacattgattattccatccttgagaaagatgtggacttt
gagtcagatcccatggaggagtgtctcaggatctttaatgaatctaaagatgtgaaaact
gaagacaagggaaggctgggcaagcagccatccaaagaggaagcaaatgaagaaaagaca
gaagataatttaactaccttgtttcctggccaaaaaagaaggatctctcatcttgtcaaa
caaggaaatgcagagaccccgagcaagccggtggtgcggccctaccgtccccccacggcc
caggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggttggg
gctgctcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcacgtgcca
aatgcagccctcaccgcagcggccaagcaaagccttgggagcagcaaggcagctgttggt
ggcaggagtgtcacaccttccaatgactctgaagcctccacccttcctctgaagccttgc
actttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagcacat
gttccctccttacagagcaccactttacagaggcctgttattcccacagagtttggtgct
aaagtcccaaccaacattcgccagaggtatctcaatctcttcattgatgagtgcctgaaa
ttctgctcctcctcccaggaagctttcgacaaggccctggcagaggagaaggtggcctac
gagcgcagcaccagccgcaacatctacctgaacgtggctgtgaacaccctgaagaagctc
cgcagcctcgtgcccaactccccagccagcaccaacaagacaagcaacaagaaggtggtg
tcccacgaggctgtgctgggagggaagcttgctgccaagaccagcttcaccctgaaccgc
tcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggag
tacctgatgactgaggagcagctcaaggagaatgggtacccaatgcctcaccctgagaag
gctggacgggctgtgctctacactgcagaggagaagaaagtcactgactcctcgtgcagg
atctgctgccgctgtggcaccgagtacatggtgtcggcctcggggagctgcatccgccgg
gaggagtgcgtgcaccactgggggcggctgcgcaagcagagagtgccaggtgggtgggaa
actcactacagctgctgctctggagctgtggggtcaccaggctgccaggttgctaaacaa
cacgtgcacgatgggcgcaaggagagcctggatggttttgtcaagacttttgagaagctg
cccacaactgatggctaccctgggatctatgccttagactgtgaaatgtgctacactaag
caaggactggagctgacaagagtgactgtgatcaactcagagctgaaggtggtgtatgac
acctttgtcaagccagactccaaggtggtggattacaacaccaggttctcaggtgtgaca
gaagaggacctggagaacacgagcatcaccctgcgggatgtccaagccgtcctcctgaac
atgttcagtgcagacaccattctgatagggcacagcttggaaagcgacttatttgcacta
aagctgatccatggcactgtggtggacacagccatcgtgttcccccaccgcctggggctg
ccctacaagcgggcgctgcgcacgctgatggccgactacctcaaacgcatcatccaggac
aatgtggaaggacacgactccagtgaggatgccagagcctgcatggagctgatggtgtgg
aagatcaaagaggatgccaaggtgaagcgatga
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integrated database retrieval system
