Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458837
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Entry
135458837 CDS
T09958
Symbol
SIN3B
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135458837 (SIN3B)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135458837 (SIN3B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
135458837
NCBI-ProteinID:
XP_064590307
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All DBs
Position
28:complement(2899164..2915078)
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AA seq
1139 aa
AA seq
DB search
MAAGGGGGGRGAGGGSAPRWGGGGGRAAPHEKLPVHVEDALSYLDQVKIRFGSDPATYNG
FLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPL
NSQVPPEPVPSALPGSGLVLHYSQENSHNHSDCSEEFRQQLPYKEDKSQIPLESDSVEFN
NAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRG
QEDLLSEFGQFLPEAKRSLFTGNGPCEVNSVQKTEHEKNLEHSKKRSRPLLLRPVSGPAK
KKMKLRGTKDLSVATVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSE
LLQLVTPFLGKFPELFAQFKSFLGVKELSFASPLSDRSGDGMSREIDYASCKRIGSSYRA
LPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELD
VVLETNLATIRVLESVQKKLSRLSQEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAPEI
IESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQND
TKALRSKSLLNEIESVYDEHQEQHSEGRSSSTNEPHLIFIYEDKQILEDAASLISYYVKR
QPTIQKEDQATIRQIVHHFIPELFFSQPPEHNISEESTDEDRENHQGQNLDTPELRKKHV
PGPPSSPLETKATFCDVTAAEPHNTLDDVYSLFFVNNNWYFFLRLHQTLCSRLLKIYRQA
QKQLLEYRTEKEREKLLCEGRKEKTNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLDGN
IDPTQYEDTLREMFTIHAYIGFTMDKLVQNIVRQLHHLVSDDICLKVVELYLNERKRGAA
GGNLSSRCVRAAKETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEETQTEDPV
EVQHLANYMEQYVGVEGAPNNQNDGFLLKPVFLQRNLKKFRKWQCKQVRALRSEVKSSWK
RLIGVESACNVDCRFKLNTHKMMFIMNSEDYMYRRGALCRAKQVQPVVLLKHHQQFEEWH
NRWLEENVSMEAVDVVQDWLMGDEDEEMVPCKTTCETVNVHGVPVNRYRVQYSRRPASP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggggcggcggcggcggccgcggggccggcgggggcagcgccccgcgctgg
ggcggcggcggcggccgggccgcgccgcacgagaagctgccggtgcacgtggaggatgcc
ctttcctacctggaccaggtgaagattcgctttggcagcgaccccgccacctacaacggc
ttcctggagatcatgaaggagttcaagagccagagcattgacacacctggagtcatccga
cgtgtttctcagcttttccatgagcatcctgacctcattgtaggattcaatgcatttctg
cctctgggctacaggatagaaattccaaagaatgggaaattaagtatacagtcacctttg
aatagtcaggtgcccccagagcctgttcccagtgcactccctggcagtgggctggtcttg
cactactcccaggagaactcccacaaccacagcgactgctccgaggagttccgccagcag
cttccctacaaagaagataaatcccaaatccccctggaatctgattctgtggagttcaat
aatgccatcagttacgtgaataagatcaaaacacgtttccttgaccatccagagatttac
agatcctttctagaaattcttcacacttaccagaaggagcagctgaacaccaagggcaga
cccttccggggcatgtcagaggaggaagtgttcactgaagtggccaatctgttccgggga
caggaggatctgctctcagagtttggacagttcctcccagaggcaaaaaggtctttgttc
acaggaaatggaccatgtgaagtgaacagtgtccagaaaactgagcatgagaagaatctg
gagcacagcaagaagcgatccaggccgctgctgctgcgtcctgtttctggcccagcaaag
aagaaaatgaagctgcgaggtaccaaagatctgtcagtcgcaacagtggggaaatatggg
acactgcaagagttttccttctttgacaaggtgcgcagggtgctcaagagtcaggaggtc
tatgaaaattttctccgttgcattgctctcttcaaccaggagttggtctctggctctgag
ttgctccagcttgttacaccctttttagggaaattcccagaactctttgcacagttcaag
tccttccttggggtgaaagaactttcctttgcttctcctctgagcgaccgctccggggac
ggaatgagccgggaaatcgattacgcctcctgcaaacgcatcggatccagttacagagct
ctcccaaaaacctaccagcagcccaagtgcagtgggagaacagccatttgcaaggaggtg
ttaaatgatacctgggtttcatttccatcctggtctgaagattccacttttgtcagctcc
aagaagactccgtatgaggagcagctgcaccgctgcgaggacgagcgctttgagctggat
gttgtcctggagaccaatttagccacaatccgggtgctggagagtgtgcagaagaaactg
tcccgcctgagccaggaggaccaggagaaatttcgcctggatgattgtctgggaggaacc
tcagaggtgatccagcgccgggccatctaccgcatctacggcgacaaagcgcccgagatc
atcgagagtctgaagaaaaacccagttactgctgtccctgtggttctgaagaggttgaaa
gcaaaagaggaagaatggagggaggcccagcagggcttcaacaagatttggagggagcag
tatgagaaggcctatttgaaatccctggaccaccaggctgtcaacttcaagcagaatgac
accaaagctctgcgctccaagagcttgctgaatgaaattgagagtgtttatgacgagcac
caggagcagcattcagaggggaggagttcatccacaaatgagcctcatcttatcttcatc
tatgaagacaagcagattttggaagatgcagcttctcttatcagctattatgtgaaaagg
cagcccaccatccaaaaggaggatcaggcaaccatcaggcagattgtgcatcacttcata
cctgagctcttcttctctcagccacctgaacacaacatttctgaggaatcaacagatgag
gacagagaaaaccaccaggggcagaacctggatactcctgagctgaggaaaaaacacgtg
cctgggcctccaagcagtcctttggagaccaaagccaccttctgtgatgtgacagctgct
gagccccacaacaccctggatgatgtttacagcctcttctttgtcaataataattggtat
ttcttcctacgccttcaccagactctgtgctccaggctcctcaagatttatcgccaggcc
cagaagcagcttctggaatataggactgagaaagagagagagaagctcctctgtgaaggg
aggaaagaaaaaaccaatgatccagccatggagctgagactcaaacagccaagtgaggtg
gagctggaggaatactacccagccttcctggacatggtgaggagccttctggatgggaac
attgaccccactcagtacgaggacaccctgagggagatgttcaccatccacgcctacatc
ggcttcaccatggacaagctggtgcagaacatcgtgcgccagcttcaccatctagtgagc
gatgacatctgcctgaaggtggtggagctctacctgaacgagaggaagcgaggagctgct
ggggggaatctgtcatcccgctgtgtccgggcagcaaaggagaccagctaccagtggaag
gctgaacggtgcatggctgatgagaactgcttcaaggtcatgtttctccagaggaaagga
caggtgatcatgactattgagctgctggatacagaagaaacccagacagaagatcctgtg
gaggtccagcacctggcaaactacatggagcagtacgttggggtggaaggagctcccaac
aaccagaacgatggcttcctcctgaaaccggtctttctgcaaaggaacctgaagaagttt
cgcaagtggcagtgcaagcaggtgagggccctgcgcagcgaggtcaagagctcctggaag
cgcctgatcggggtggagagcgcctgcaacgtcgactgccgcttcaaactcaacacccac
aagatgatgttcatcatgaactctgaggattacatgtacaggaggggagctctctgcaga
gccaagcaggtgcagcccgtggtgctgctgaagcaccaccagcagttcgaggagtggcac
aaccggtggctggaggagaacgtgtccatggaggccgtggatgtggttcaagactggctc
atgggggatgaggatgaggagatggtgccctgcaaaaccacctgtgagacagtgaatgtc
cacggggtgcccgtgaacagatacagagtgcagtacagccgccgtcctgcttcaccctga
DBGET
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