Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458846
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Entry
135458846 CDS
T09958
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04145
Phagosome
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135458846 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135458846 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135458846 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135458846 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135458846 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135458846 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
zle00536
]
135458846 (COMP)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Phagocytosis
Opsonins
135458846 (COMP)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135458846 (COMP)
Exosomal proteins of colorectal cancer cells
135458846 (COMP)
Exosomal proteins of bladder cancer cells
135458846 (COMP)
Glycosaminoglycan binding proteins [BR:
zle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135458846 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
135458846
NCBI-ProteinID:
XP_064590321
LinkDB
All DBs
Position
28:complement(5661005..5679832)
Genome browser
AA seq
790 aa
AA seq
DB search
MVPALLLLLLGWPGCCGQQRRIDPSRPFPSAAARREPALSRGIPGNALGAGGGEVGPEML
QEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFKRCVPNP
CFPGVPCTESGTGFRCGPCPAGYSGNGTHCSDINECNANPCFPKVQCINTSPGFRCDPCP
PGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFV
GDQISGCRSPTATGARRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTD
IDGVPDEKQRCSDKNCRKDNCVTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYT
RNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGKGDECDDDMDGDGIRNSLDNCRRVP
NPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTV
PNSSQVDTDGDGLGDECDEDDDDDGIPDFRPPGPDNCRLVPNPGQEDSDGDGVGNLCEDD
FDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSD
PGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPF
RAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQ
HRPQVGYIRARFYEGPEVVADTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPE
DYETFRFQQD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtcccggcgctgctgctgctgctgctcggctggcccggctgctgcggccaacagcga
cggatcgatcccagccggcccttccccagcgccgccgcccgccgggagcccgccctgagc
cgcggcattcccgggaatgcgctgggagcaggaggaggagaagtcgggccagaaatgctg
caagaaatgagggaaaccaaccgggtgctgctggaagttcgggatttgttgaagcagcag
atcaaggagatcacgttcctgaagaacacggtcatggagtgcgacgcctgcggcatgcgg
ccggaggtgaccggccccgtggtcaccgtgacccagttcaagcgctgcgtgcccaacccg
tgcttcccgggcgtgccctgcaccgagagcggcaccggcttccgctgcgggccctgcccg
gcgggctacagcggcaacggcacccactgctccgacatcaacgagtgcaatgccaacccc
tgcttcccgaaagtgcagtgcattaacaccagccccggcttccgctgcgacccctgcccg
cccggcttcacggggcagctgctggagggggtgggactggcctttgccagggccaacaag
caggtgtgcaccgacatcaacgagtgtgagactggagctgccaccaattgtgtccccaac
tccatctgcatcaacactcggggatcctacaagtgcggggcctgcaagccgggctttgtg
ggggatcagatcagcggctgccggagcccgacggcgaccggggcccggcgctgccccaac
ggcgagatcagcccgtgccacgagaaagccgagtgcatcgtggagagggacggctcgctg
tcctgccagtgcctcgtgggctgggcagggaacggctacgtgtgcggcaaggacacggac
atcgacggcgtccccgacgagaagcagcgctgctccgacaagaattgccgcaaggacaac
tgcgtgaccgtgcccaactcgggccaggaggacgcggaccgggacggcatcggcgacgcc
tgcgacgacgacgcggacggggacgggatccccaacgccgaggacaactgtgtgtacacc
aggaacgcggaccagcgcaacgccgacaaggacaactttggggacgcgtgtgacaactgc
cggcaggtgaagaacaacgaccagagggacatcgacggcgacggcaaaggcgacgagtgc
gacgacgacatggatggggacgggatcaggaacagcctggacaactgcaggagagtgccc
aaccctgaccagagggacggcgacggcgacggcgtgggggacgcctgtgacagctgcccc
accctcagcaaccccgaccagaaagacactgaccacgatctggtgggagatgtctgtgac
accaaccaggacagtgacggcgacgggcaccaggactcgcgggacaactgccccacggtg
cccaacagctcccaggtggacacggacggggacgggctgggggatgagtgtgatgaggat
gatgatgacgatggcatccccgacttcagaccccccggccccgacaactgcaggctggtg
cccaaccccggccaggaggactcggatggggacggcgtggggaacctgtgcgaggacgac
ttcgacagggacatggtgatcgacaggatcgacgtgtgccccgagaacgccgaggtgacg
ctcaccgacttcagggccttccagaccgtggtgctggaccccgagggggacgctcagatt
gaccccaactggatcgtcctcaaccagggcatggagattgtccagaccatgaacagcgac
ccgggcctggctgtagggtacacagccttcaacggggtggacttcgagggcaccttccac
gtcaacacggccacggacgacgactacgccgggttcatctttggctaccaggacagctcc
agcttctacgtggtgatgtggaagcagatggagcagacctactggcaggccaaccccttc
cgggcagtggcagagcctggcattcagctgaaggcagtgaaatccaaaacgggccctggg
gagtacctgcggaattccctgtggcacacgggagacaccacggaccaggtgaagctgctc
tggaaggaccccaggaactcgggctggaaggacaagacctcgtaccgctggttcctgcag
caccggccccaggtcggctacatcagggctcggttctatgagggccccgaggtcgtggcc
gacaccggcgtggtcctggacaccaccatgagaggggggcgcctcggggtcttctgcttc
tcccaggagaacatcatctggtccaacctccgctaccgctgcaacgacaccatccccgag
gactacgagacgttccggttccagcaggactga
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