Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458863
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Entry
135458863 CDS
T09958
Symbol
ABCA7
Name
(RefSeq) phospholipid-transporting ATPase ABCA7 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle02010
ABC transporters
zle04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135458863 (ABCA7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135458863 (ABCA7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zle02000
]
135458863 (ABCA7)
Transporters [BR:
zle02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135458863 (ABCA7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
AAA_22
Motif
Other DBs
NCBI-GeneID:
135458863
NCBI-ProteinID:
XP_064590351
LinkDB
All DBs
Position
28:complement(3554843..3578244)
Genome browser
AA seq
2245 aa
AA seq
DB search
MAVGTQLGLLLWKNFTYRRRQRIQLAIEILWPLFLFLILISVRRSHPPFKQHECHFPNKA
LPSAGTLPWLQGIICNMNNPCFRHATAGEAPGVVGNFDGSIVSRLLSEARQVLHRGHGQR
LLSSFSRLLPALRRLRDSGNQRRALPVREYLREDETFSRFLRDNTSLPPALVHELMGARL
SPRIFSLASLRLPLKVLVCNASVLGGFLVGSDADSTRSLQQELCALPTSQLRAMEGSFLS
QMDFPRLLAEQLSSELGGIAGTVEALGSFLRDAASLMEEVSSMPSLAELRQEIEGLRAPN
SSTGAFRALSRIACGHPEGGGLRIPSLNWYEDNDVKAFLDRNTSEHKPVASGSTSPFCRE
LLHSLESSPLSQIFWRGIKPLFVGKILYTPPGPGPDSVMAEVNRTFRELAVLGELGGAWQ
ELGPRIYTVLNSSLEMQVLQELLLAPSTAQILDGFLNGTSWKLPELVTFLTGPAGGPGLT
WHQVYADVDAVLSTLSQFMECVCLDKIEAVATEEQLVARALELLEEQQFWAAVVFQPPIN
ATAPGLPPHVRYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDLRYVWGGFVYIQDLVEQ
AVVRVHTGAAPRTGVYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVHE
KETRLKETMKTMGLSSGILWLSWFLSSFIPFLLSSALLVLILKLGNILPYSDPAVIFLFL
GTFSVATISQCFLISTFFPRANLASACGGIIYFSLYLPYVLCVAWRDYITFPLRVLVSLL
SPVAFGFGCDYFSLYEEQGVGIQWHNLAASPVPGDPYSFAAAMGLLLLDAVLYGLATWYI
EGVFPGQYGIPKPWNFPFLKSYWFGESSSSGHSLYHSSSHTAPQVLVEEPPADLQPGVSI
RNLVKVYGSSGRAAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYILG
WDIRSDIDSIRKSMGMCPQHNVLFDILTVEEHVWFYGRLKGLSEQQVQEEMEQLLQDTGL
PHKRREQTRNLSGGMQRKLSVAIAFVGGSRVVILDEPTAGVDPFSRRSIWELLLKYRKGR
TIILSTHYMDEAELLGDRTAIISQGRLCCCGSPLFLKARLGTGYHLTLVKRDRSGTGGST
GTVPGVTKKDGSDSEHSSDTGLGSERGSDASTVDVAQLSALIQKLVPGSRLVEDIGHEVL
FVLPYSGARDGAFGELFRELDARLGELGVSSYGISDTTLEEIFLKVAEDTALDADTAGTM
KGAAPGEMGDGDVADGELAKGARRAEEPRETDLLRGPACGRVRGWALTCRQLRALFTKRM
LHARRSTRGFLAQIVLPAVFVCIALLFSLIVPPFGRYPPLQLQPWMYGQQFTFFSNDAPG
DPDTARLLEALLAEPGFGTKCMKEEGKGAGLCPPASHPDGFSTPSVPPSLLEVLQRGNWT
RAKPSPPCQCSGPGAHRMLPECPEGAGGLPPPQVQRGTGDILQNLTGRNISDYLVKTYPQ
IIRQELRNKKWVNEQRYGGFSLGAGSSQALPSAAEVDQAVLELRVLLNITLGSPSDRLLA
NLSRFIEGLDARRNVKVWFNNKGWHAMVSFLNVASNGLLRARLPPGTDPARFGITATNHP
LNLTKEQLSEAALMATSVDVLVSICVIFAMSFVPASFVVFLIEERVSKAKHLQFVSGMKP
ITYWLGNFAWDMCNYLVPALLVILIFLCFQQESYVSSANLPSLVLLLLLYGWSITPLMYP
ASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQNLNDINRVLKKVFLIFPHFCL
GRGLIDMVKNQAMADAFERFGDKRFVSPLSWELAGKNMFAMAIEGIVFFLFTLLLQYHRF
FLRLGPRALELPSLGDEDQDVARERARVGNIPPHGHLLLLKDLTKVYRRRKAPAVDRLCV
AIPPGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSVLTDLQSVHQHMGYCPQF
DAITDLLTGREHLEFYSRLRGIPEEETPRVAQWGITALGLAPHADRPAGKYSGGNKRKLS
TAIALLGCPPVVFLDEPTTGMDPQARRFLWERILGVIRDGRSVVLTSHSMEECEALCTRM
AIMVNGRFRCLGSVQHLKNRFGDGYTVVVRAGGPGPAAVQALLQQHFPGIVLREQHGGLL
QYHLPARVTSLAAVFSLLAAHRGPCHIEDYSVSQTTLDQVFMHFAQEQSDGDAGEATASG
QDVAASPGRRLSRFLEDDSYQESAV
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgggcacccagctggggctgctgctctggaagaacttcacctaccgccggcgg
cagcggatccagctggctatcgagatcctgtggcccctgttcctcttccttatcttgatc
tcagtgcggcgatcccacccgcccttcaagcagcatgagtgccactttcctaacaaggcg
ctgccctctgcggggaccctgccctggctgcagggcatcatctgcaacatgaacaatccc
tgcttccgacacgccacggcgggagaggccccgggcgtggtgggcaacttcgatggctcc
atcgtgtcccggctcctgagcgaagcccggcaggtcctgcaccgcgggcacgggcagcgc
ctcctgagcagcttctcccggctcctgcccgccctgcgccggctccgggacagcggcaac
cagcggagggctctgccggtgagggaatacttgagagaggacgagactttctcccggttc
ctgcgggacaacacatccctgcccccggcgctggtgcatgagctgatgggggctcggctc
agccctcgcatcttctccttggcgagccttcgcctcccgctgaaggtcctggtctgcaac
gcctcggtgctggggggattcctggtgggcagcgacgccgactccacccggagcctgcag
caagagctctgcgcgctgcccacctcccagctccgtgccatggagggctcctttctctcc
cagatggacttcccacggctcctggcggaacagctgagctcagagctgggcggaatcgcc
ggcaccgtggaagctttgggcagcttcctgcgggatgcagcatccctgatggaggaggtc
tcctccatgcccagcctggctgagctgcgtcaggagattgaggggctgagggcccccaac
agcagcacgggtgcattcagagccctgtcccgcatcgcctgtggccaccccgagggcggg
gggctcaggatcccctccctcaactggtacgaggacaacgatgtcaaagccttcctggac
cgtaacacctcagagcacaaacccgtggcctcaggcagcaccagtcccttctgcagggag
ctgctgcacagcctggagtccagccccctgtcacagatcttctggagggggatcaagccc
ctctttgtggggaagatcctgtacaccccacctgggcctggccccgacagcgtcatggct
gaggtgaaccgaaccttccgggagctggcggtgctgggggagctggggggtgcctggcag
gagctgggaccccgaatctacaccgtcctcaacagcagcctggagatgcaggtgctccag
gagctgctgctggcccccagcacagcccagatcctggatgggttcctcaacggcacctcc
tggaagctgccagagctggtcacgttcctgacggggccagcagggggaccaggcctcacc
tggcaccaggtgtacgctgatgtggacgcagtgctgagcacgctgtcacagttcatggag
tgtgtctgcctggacaagatcgaggcagtggccaccgaggagcagctggtagcccgagcc
ctggagctgctggaggagcagcagttttgggctgcagtggtcttccagccccccatcaat
gccacagcccccgggctgccaccccacgtccgctacaagatccgcatggacatcgacgac
gtcacgaggaccaacaagatcaaggacaggttttgggacccaggccctgctgctgacccc
ttcagtgacctgcgctacgtctgggggggcttcgtgtacatccaggacctggtggagcag
gcggtggtgagggtgcacactggggctgccccacggaccggggtctacgtccagcagatg
ccctacccctgctacgtggatgatgtgttcctgagggtcctgaaccgctcgctgcctctc
ttcatgactctggcctggatctactccgtggccatgatcatcaagggggtggtgcacgag
aaggagacgcgtctcaaggagaccatgaagaccatggggctgagcagcgggatcctctgg
ctcagctggttcctcagcagcttcatccccttcctcctcagctctgccctccttgtcctc
atcctcaagctgggaaacatcctgccctacagcgacccagcagtcatcttcctcttcctc
ggcaccttctcagtggccaccatcagccagtgcttcctcatcagcaccttcttcccccgt
gccaacctggcctcggcgtgtggtggcatcatttacttctctctgtacctgccctacgtg
ctgtgcgtggcctggcgtgactacatcaccttcccgctccgtgtccttgtgagcctgctg
tcccccgtggcctttggttttggctgtgattacttctccctctatgaggaacaaggggtg
ggcatccagtggcacaacctggctgccagccccgtgccaggagacccgtacagctttgct
gcagccatggggctgctgctgctggatgctgtcctctatggcctggccacctggtacatc
gagggtgtcttcccaggtcagtatgggatccccaagccctggaatttccccttcctgaag
agctactggtttggggaatcatcctcatctgggcactccctgtaccacagcagctcccac
actgcaccccaagtgctggtggaggagccacctgctgatctccagcccggcgtctccatc
cgcaacctggtgaaggtttatggcagcagcggccgtgcagccgtcaacgggctgagcctg
gacttctacgaggggcagatcacatccttcctgggccacaacggcgctggaaagaccacc
accatgtccatcctgactggcctcctgccccccacctcgggcactgcctacatcctgggc
tgggacatccgctccgacatcgacagcatccgcaaatccatggggatgtgtccccagcac
aacgtgctcttcgacatcctgacggtggaggagcacgtctggttctacgggcggctgaag
gggctctcggagcagcaggtgcaggaggagatggagcagctgctccaggacacggggctg
ccccacaagcgccgggagcagaccaggaacctctctggcgggatgcagaggaagctctcg
gtggccatcgccttcgtgggcggctcccgcgtggtgatcctggacgagcccacggctggc
gtggatcccttctcccgccgcagcatctgggagctgctgctcaagtaccgcaaaggtcgc
accatcatcctgtccacccactacatggacgaggcggagctgctgggggaccgcactgcc
atcatctcccagggccggctctgctgttgtggctcccccctcttcctcaaggccaggctt
ggcactgggtaccacctcaccctggtgaagagggacaggagcgggacaggcggcagcacc
ggcaccgtccccggtgtcaccaaaaaggatggcagtgactcggagcacagcagtgacacc
ggcctgggcagcgagcggggcagtgatgccagcactgtggatgtggcccagctgtcggcg
ctgatccagaagctggtccccggctccaggctggtggaggacatcgggcacgaggtgctg
tttgtcctgccctacagcggggccagggatggggcctttggggagctgttccgcgagctg
gacgcgcgcctgggcgagctgggggtctccagctacggcatctctgacaccaccctggag
gagatattcctgaaggtggctgaggacacagcactggacgctgacactgcaggcaccatg
aaaggagcagcccctggcgagatgggagacggggatgtggctgatggagagctggccaaa
ggagccaggcgagcagaggagccccgggagaccgacctgctgcggggcccggcgtgcggg
cgggtgcggggctgggcgctcacctgccgccagctccgcgccctcttcaccaagaggatg
ctccacgcccgccgcagcacccgcggcttcctggcgcagatcgtgctccccgccgtgttc
gtgtgcatcgcgctgctcttcagcctcatcgtgccgcccttcgggaggtacccaccgctg
cagctgcagccctggatgtacgggcagcagttcaccttcttcagcaacgatgctccggga
gatcccgacacagcgcggctgctggaggcgctcctggccgagcccggcttcggcaccaag
tgcatgaaggaagaggggaagggggcaggcctgtgccccccagcttcccatcccgatgga
ttctcaaccccttcagtgcccccatccctgctggaggtgctgcagcgtgggaactggaca
cgggcaaagccatccccaccgtgccagtgcagcgggccaggggcacacaggatgctgccc
gagtgtcccgagggggccggggggctccccccaccccaggtgcagaggggcacgggggac
atccttcagaacctgacgggcaggaacatctctgactacctggtgaagacctatccccag
atcatccgtcaggagctgaggaacaagaagtgggtgaatgagcagaggtacggcggcttc
tccctgggtgctggcagctcccaggccctgccatcggcagcggaggtggatcaggcggtg
ctggagctccgtgtgctgctcaacatcaccctgggcagcccctcggatcggctcctggcc
aacctcagccgcttcattgagggcttggatgcacgcaggaacgtcaaggtctggttcaac
aacaagggctggcacgccatggtctccttcctcaacgtggccagcaatgggctgctgcga
gcccggctgccccccggcaccgaccccgcacgcttcggcatcacggccaccaaccacccc
ctgaacctcaccaaggagcagctcagcgaggccgccctgatggccacctctgtggacgtg
ctggtctccatctgcgtgatcttcgccatgtccttcgtcccggccagctttgttgtcttc
ctcattgaggagagggtcagcaaggccaagcacctccagtttgtcagcgggatgaagccc
atcacctactggctgggcaacttcgcctgggacatgtgcaactacctggtgcccgcgctg
ctggtcatcctcatcttcctctgcttccagcaggaatcctacgtgtcctcggccaacctg
ccctccctggtgctgctgctgctgctctacggatggtccatcacccccctgatgtatcca
gcctccttcctcttcagcatccccagcactgcctacgtggccctgacctgcatcaacctc
ttcattggcatcaacggcagcgtggccacctttgtgctggagctctttgtggaccagaac
ctcaacgacatcaaccgtgtcctgaagaaggttttcctcatcttcccccacttctgcttg
ggccgaggcctcattgacatggtgaagaaccaggcaatggctgatgcctttgagaggttt
ggggacaagcgcttcgtgtcccccctctcctgggagctggcagggaagaacatgtttgcc
atggccatcgagggcattgtcttcttcctcttcaccctcctgctgcagtaccaccgcttc
ttcctgcgcctgggcccacgggctctggagctgccctcgctgggagatgaggaccaggac
gtggccagggagcgggcgagggtgggcaacatccccccacacggccacctcctgcttctg
aaggacctgaccaaggtgtaccggcgcaggaaggctccggccgtggaccggctctgcgtg
gccattccccccggggagtgctttggcctcctgggggtgaacggtgctgggaaaacatcc
accttcaagatgctgacaggggacacggaggtgacgctgggggaggcctggttgaagggg
cacagcgtgctcaccgacctccagtctgtccaccagcacatgggttactgtccccagttt
gatgccatcacggacctgctgacggggcgggagcacctggagttctacagccgcctgcgt
ggcatcccagaggaagagacccccagggtggctcagtggggcatcaccgctctggggctg
gccccacacgccgaccggccggcgggcaaatacagcgggggcaacaaacgcaaactctcc
acggccatcgccctcctcggctgtccccccgttgttttcctggatgagcccacgacgggg
atggacccgcaagcccggaggttcctgtgggagcgaatccttggtgtgatccgggacgga
cggtccgtggtgctcacatcccacagcatggaggagtgcgaggcgctctgcaccaggatg
gccatcatggtcaacggccgcttccgctgcctgggcagcgtccagcacctcaagaacagg
tttggggatgggtacacggtggtggtgcgggcggggggccctggcccggcagcggtgcag
gccctgctgcagcagcatttccctggcattgtgctgcgggagcagcacggggggctgctg
cagtaccacctccctgcccgtgtcacctccctggccgccgtcttcagccttctggccgcc
caccgtggcccctgccacatagaggactactcagtgtcccagaccacgctggaccaggtc
ttcatgcactttgcccaggagcagagcgatggggacgccggggaggcgacagcctcagga
caggatgtggccgccagtcccgggaggaggctgagcaggttcctggaggatgacagctac
caggagagcgctgtctga
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integrated database retrieval system
