Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458977
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Entry
135458977 CDS
T09958
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135458977
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zle03310
]
135458977
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135458977
Nuclear receptors [BR:
zle03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135458977
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135458977
NCBI-ProteinID:
XP_064590579
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Position
28:1469406..1487678
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AA seq
465 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSGGAKDEPEPLSRV
YTTSVSSGLSDLDDISTLSDGLLFDFPLTPDGGSTYYNLDLLASAQPSPDQSSLDVADAT
LIKQESLYELMLEPALLAHGALEGAQLPPDISVLEIDRVAQNVVKSHLETCQYTTEELKR
LAWSLYSPEEVRALQSKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTVLFEGKFGGMQMFKSLGCDDLIGAVFELGRTLCRLQLSD
EELALFTAAVLLSPDRPWLTESKKVQKLQDKIYVALQHEIQKKHSAEDKLSKMVSKLPLM
KTICNLHLDKLEFFRLLHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaggtgatcccgtgcaagatctgcggagacaaatcctcagggatc
cactacggtgtcatcacctgcgaaggctgcaagggtttctttcggaggagccagcagaac
aatgccagctactcgtgctcccggcagaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgcctgcagaaatgcctggcactgggcatgtcccgcgacgcggtg
aagttcggccgcatgtccaagaagcagcgggacagcctctacgccgaggtgcagaagcac
cagcagagccaggagcagagcggcggcgccaaggacgagcccgagcccctgagccgcgtg
tacaccacgagcgtcagcagcggcctctcggacctggacgacatctccacgctgtccgac
gggctcctcttcgacttccccctgacccccgacggcggcagcacctactacaacctggac
ctgctggcctcggcacagccctcgcccgaccagtccagcctggacgtggccgatgccacg
ctcatcaagcaggaatccctctacgagctgatgctggagccggcgctgctggcacacggg
gcgctggagggagcccagctgccccctgacatctctgtcctggagattgaccgggtggcc
cagaacgtggtgaagtcccacctggagacgtgccagtacaccacggaggagctgaagcgc
ctggcctggagcctctactcgcccgaggaggtccgtgccctgcagagcaagagctgcgag
gccatgtggcagcagtgctcgctgcagatctccaacgccatccagtacgtggtggagttc
gccaagcgcatcgacggcttcatggagctctgccagaacgaccagatcatcctgctgaaa
gccggttgcctcgaggtgctcctgatccgcatgatccgcgccttcaaccccctgaacaac
accgtcctcttcgagggcaagttcggtggcatgcagatgttcaaatctctcggctgtgac
gacctcatcggtgccgtcttcgagctgggcaggaccctgtgccgcctgcagctgtcggac
gaggagctcgccctcttcactgctgctgtgctgctctccccagaccgcccgtggctgacc
gagtccaagaaggtgcagaagctccaggacaagatctacgtggctctgcagcacgagatc
cagaagaaacactccgctgaggacaagctctcgaagatggtttccaagctgcccttgatg
aagaccatttgcaacctgcacttggacaagctggaatttttccgtctcctgcacccggag
actgccatgaacttcccccctctctacaaggaggttttcaactctgagcttcagtacagc
gacccccgggagagctaa
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