KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459089
Entry
135459089         CDS       T09958                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04137  Mitophagy - animal
zle04144  Endocytosis
zle04145  Phagosome
zle04148  Efferocytosis
zle05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:zle00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    135459089 (RAB5B)
   04145 Phagosome
    135459089 (RAB5B)
   04137 Mitophagy - animal
    135459089 (RAB5B)
   04148 Efferocytosis
    135459089 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135459089 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zle04131]
    135459089 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zle04147]
    135459089 (RAB5B)
   04031 GTP-binding proteins [BR:zle04031]
    135459089 (RAB5B)
Membrane trafficking [BR:zle04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    135459089 (RAB5B)
 Endosome - Lysosome transport
    135459089 (RAB5B)
Exosome [BR:zle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135459089 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   135459089 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   135459089 (RAB5B)
  Exosomal proteins of melanoma cells
   135459089 (RAB5B)
GTP-binding proteins [BR:zle04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    135459089 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 SDR-like
Other DBs
NCBI-GeneID: 135459089
NCBI-ProteinID: XP_064590797
LinkDB
Position
29:complement(2471127..2483618)
AA seq 215 aa
MAARGAQRPNGHSQPSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARARGWVKELQR
QASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKTEPQSTSGAGGRGRGVDLSEQSPQGRGQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccgcgcgcggggcccagcggcccaacgggcactcgcagcccagtaagatctgccag
ttcaaactggtgctactgggagagtcggccgtgggcaaatccagcctggtgctgcgcttc
gtcaagggccagttccacgagtaccaggagagcaccatcggcgcggcgttcctgacgcag
tccgtctgtctggacgacaccacggtcaagtttgagatctgggacacggcggggcaggag
cgctaccacagcctggcccccatgtactaccggggagcccaggctgccatcgtggtctac
gacatcaccaaccaggagacgtttgcccgtgcccggggctgggtgaaggagctgcagcgc
caggccagccccagcatcgtcatcgccctggctggaaacaaagctgacctggccagcaag
aggatggtggagtacgaggaagcccaggcctacgctgatgacaacagcctgctcttcatg
gagacctcggccaagacagccatgaatgtcaacgacctctttctggccattgccaagaag
ctgccaaagacggagccgcagagcacgagcggggccgggggccggggccggggcgtggac
ctgagcgagcagagcccgcagggccgcgggcagtgctgcagcaactga

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