Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459118
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Entry
135459118 CDS
T09958
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135459118 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135459118 (GLI1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
135459118 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
DUF7565
Motif
Other DBs
NCBI-GeneID:
135459118
NCBI-ProteinID:
XP_064590841
LinkDB
All DBs
Position
29:1214073..1228379
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AA seq
1258 aa
AA seq
DB search
MFDPSGPPAAGYSEHCCLHAPHGTAPAPPGPPGLDFPVCHQPGHRGYGLAPGAEHAGDGS
RFSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCASSGGSYGHLSI
STISPSLGYQSPPGQQKGQGHLYPTPPACSSHEVPTRGGLLQHPPARGALKHCQQLKLEW
SLSSPLSAKFPEERSEGDVSSPASTGTQDPLLGMLDVREELEKEDGKAECEAVYETNCYW
DGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVVHMRRHTGEK
PHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDVGPGRALPTPGAPPDMKQE
KEANGPSEARKDDGKLLVPELALKPQPSPGGQSSCSSDHSPLGSTTNNDSGVEMAGNAGG
SYEDLSTLEDVVPGEPMGTSGLMALHKLENLRIDKLKQLRKPTASKGLSLPPIPGAGLPG
EVPPPASHRRIAELSAAELGLAAPGERRSSGTSTVSSAYTVSRRSSLVSPYLCPAGDAAA
VPVPADGYGAASPDEPRRSGDTGGLPGVGDLTPAQRYRLKAKYAAATGGPPPTPLPSVEQ
GAPGGHGGTPGGYPAHAGPRCVTNGLVRRNSSNENPGYPGSVPAQLVPRHGVRRASDPAR
TVAKPPAMPRVQRFKSVGNVSVPGAGRTVLQPLGGSEANLQRHGFSPRPPSITENVFMES
MGGPGPESGLLDMEQYLGYPEESFPCQGTGVELQGGIYGAHRTMVGTHGDMEEALLQQPE
FSLPPCQMNQRFPNLPAGNNRAVPEPWDGPTQGTLGMSSRQGVGAPTMSGPHCAHQNIEY
PHPGACGQHPKLVSSCQDQEFSGGHRFNRLQIKSEQRYPAPSPALAPCPSTKLAGPSASP
AAFGHSMDMGHGGYPPVGPTPGGYMGMASPGARRAQTPTLQSKEVMVRNYVEAQQALMWG
EQPPPCKGSVAGVGLGSEPGQCQAVPAPPPYLSPRYCSYQPKGDHLQSLAEPQHLLSPPC
FNPEMIPHPPAGPKPPAHQPALSYPSSLAQPGHGYDGVDAGARRLPRLPPARAVPEGAGT
LPLYYPGQGGKGGHKLLGQGAASCGHYGPEGLKGTSCYYLDSGEQVANSLDSLDLENTHL
DFAAIVEDVETPPALPGPPSPAGGLLMPSHGGANMAVGDMSSMLSTLAGESHFLNSLS
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacccctcgggacccccggccgccggctacagcgagcactgctgcctgcacgcc
ccgcacggaacagcccccgcacccccgggaccaccagggctggatttccccgtgtgccac
cagcccgggcaccgcgggtatgggctggcaccgggagctgaacacgccggggatggctcc
cgtttctccacgccccgaggcgcagggaagctgggcaagaagcgagccctgtccatctcc
cccctgtccgactccagcatcgacctgcagaccgtgatccgcacctcgcccaactccctg
gtggctttcatcaactcccgctgcgcctcctccggcggctcctacggtcacctgtccatc
agcaccatcagcccgtccctggggtaccagagcccacctgggcagcagaagggccaaggg
cacctgtacccgacacccccagcgtgcagctcccacgaggtgcccacacgtggggggctg
ctgcagcacccacctgctcgaggggcactgaaacactgccagcagctgaagctggagtgg
agcctgagcagccccctgagtgccaaattcccagaggagcgatctgagggtgacgtctcc
agcccagcatccacgggcacccaggaccccttgctgggcatgctggatgtccgggaggag
ctggagaaggaggatggcaaagccgagtgtgaggctgtgtatgagaccaactgctactgg
gacggctgtgccaaggagttcgacacgcaggagcagctggtgcaccacatcaacaacgag
cacatccacggcgagaagaaggagttcgtgtgccactgggcggcgtgctcgcgggagcag
aggcccttcaaggctcagtacatgctggtggtgcacatgaggcgccacacgggagagaag
cctcacaagtgcacgtttgagggctgcaacaaggcctattcccgcctggagaacctcaag
acccacctgcgctcgcacacgggggagaaaccctacgtgtgtgagcacgaggggtgcaac
aaagccttctccaacgcctccgaccgcgccaagcaccagaaccgcacccactccaacgag
aagccctacgtgtgcaagattcccggctgcaccaagcgctacaccgaccccagctccctg
cgcaaacacgtcaagaccgtgcacggccccgacgcccacgtcaccaaaaagcaccggggg
gacgtggggccgggccgggcactgcccacccccggtgcccccccagacatgaagcaggag
aaggaggcaaacggccccagcgaggctcggaaggacgatgggaaactcctggtgcccgag
ctggccttgaagccccagcccagcccaggcgggcaatcctcgtgcagcagcgaccactca
cccctgggcagcaccaccaacaacgacagcggcgtggagatggccgggaacgccggcggc
agctacgaggacctgtccacgctggaggacgtggtgcccggggagcccatgggcacctcg
gggctcatggccctgcacaaactggagaaccttcgcatcgacaagctgaagcagctgagg
aaaccgacggcttccaaggggctgagcctgccccccatccctggagccggcctgcccggg
gaggtgccaccgccggcctcccaccgccgcatcgccgagctgtcggcggccgagctgggc
ctggcggcgccgggcgagcgccgcagcagcggcaccagcaccgtcagctcagcctacacc
gtcagccgccgctcctcgctggtgtccccgtacctgtgcccggccggtgacgccgcggcc
gtgcccgtgcccgctgacggttacggtgccgcctctccggatgagccgcggcgctccggt
gataccggggggctgccgggggtgggtgacctcaccccggcgcagcgttaccgcctcaag
gccaagtacgcggcggccacgggcggccccccgcccaccccgctgcccagcgtggagcag
ggggcaccaggtgggcacggtggcacgcccgggggttaccccgcgcacgccgggcctcgc
tgtgtcaccaatggcttggtgaggaggaacagctccaacgagaaccccggctacccaggc
agcgtgcccgctcagctggtgccccggcacggcgtgcgacgggcgagtgaccctgcccgg
acggtggccaagcctccggccatgcccagggtgcagaggtttaagagtgtgggcaatgtg
agcgtgccaggcgcgggcaggacggtgctgcagcccttgggtgggtctgaggccaacctg
cagcgccatggcttctccccacgcccccccagcatcactgagaacgtcttcatggagagc
atggggggccctggccccgaatccggcctgctggacatggagcagtacctgggttatcct
gaggaaagcttcccgtgccagggcaccggcgtggagctccagggtggcatctacggcgct
caccggaccatggtggggacacatggggacatggaggaggcgctgctgcagcagcctgag
ttctccctcccgccgtgccagatgaaccagcgcttccccaatttgcctgctgggaacaac
agggctgtgccagagccctgggatggacccacccagggcacactgggcatgagctccagg
caaggtgtgggtgctcccaccatgtctgggccacactgtgcccatcaaaacatcgagtac
ccccaccccggcgcctgtgggcagcatcccaaactggtgagctcatgccaggaccaagaa
ttttcgggggggcatcgttttaaccggctccagatcaaatccgagcagcgatacccagcg
ccgagcccggcactggctccctgccccagcaccaagctggccgggccctcggcctccccc
gctgcctttgggcacagcatggacatggggcacggtgggtacccccctgtgggacccaca
ccgggcgggtacatgggcatggccagcccgggtgcccgccgagcccagacccccaccctg
cagagcaaagaggtgatggtcaggaactacgtggaggcacagcaggcgctgatgtggggg
gagcagccgcccccctgcaagggcagcgtggctggcgtggggctgggcagcgagcccggg
cagtgccaggccgtgccagccccgccgccgtacctcagccccaggtactgcagctaccaa
cccaaaggggatcacctgcagagcctggcggagccccagcacctcctgagcccgccctgc
ttcaaccccgagatgatcccacaccctccagctggccccaaaccaccggcgcaccagcct
gccctgagctacccgagcagcctggcacagcctgggcatggctacgacggggtggacgcc
ggtgcccggcgcctgccacgcttgcccccggcccgtgccgtgcccgagggagccgggacc
ctccccctgtactacccagggcaggggggcaaaggtgggcacaagctgctggggcagggg
gcagcgagctgcgggcactacggccccgagggactcaagggcacctcctgttactacctg
gactctggggagcaggtggccaacagcctggactcgctggacctggagaacacgcacctt
gactttgctgccattgtggaggacgtggagacccccccggcgctgcccggaccccccagc
ccggccggggggctcctgatgccctcgcatgggggtgccaacatggcagtgggggacatg
agctccatgctgagcacgctggcaggggagagccacttcctcaactcgctgtcctaa
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