Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459174
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Entry
135459174 CDS
T09958
Name
(RefSeq) keratin, type II cytoskeletal 6C-like
KO
K07605
type II keratin, basic
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135459174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135459174
04147 Exosome [BR:
zle04147
]
135459174
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
135459174
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
135459174
Exosomal proteins of other body fluids (saliva and urine)
135459174
Exosomal proteins of colorectal cancer cells
135459174
Exosomal proteins of bladder cancer cells
135459174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
ATG16
TPR_MLP1_2
DUF7491
CENP-F_leu_zip
FapA
COG6_N
Topoisom_I_N
Atg11_middle
Motif
Other DBs
NCBI-GeneID:
135459174
NCBI-ProteinID:
XP_064590955
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All DBs
Position
29:205206..209951
Genome browser
AA seq
625 aa
AA seq
DB search
MSRQSVCRSFGGGSRRGFSSCSAIGGGFGGGGRSRSSYSSYSVSRGFGGGGRCGGFGSRS
LHNMGGSARISMGGCYGGGYGSRMGGFGGSYGGLGSFGGGMGGGGGGGMCGFGGMGGGGM
GGFGGGMGGFGGGMGGGGMGGFSGPGFGMGGPGRGGPGIQPVQIDTTLLRPVHVEIDPQI
QQVKNQEKEQIKTLNNQFASFIDKVRFLEQQNKVLSTKWELLQQQGPSGPRKNLDVIFEN
YIQNLRRQLDSILAQRGQLESELQNMQQYVEDYKTKYEEEINRRTTAENEFVVLKKDVDS
AYMTKVELEARVGALTDEINFLRCIYEEELAQMQTISRDLSVVVSMDNNRHLDLDSIIEE
VRRQYEQIAQSSRAEAEAWYQSQYEQLQSTAGRHGDNLRNTKIEIQELTRNVQRLRAEIE
NVKKQNQQLQAAIAEAEERGEMALKDARLKLEELESALQKDKEELARLLKEYQELLNVKI
ALDVEIAMYRKLLEGEENRLCNDSMANVNVSVVGRTTVSGGRGGMGGGFGGSGMGGGFGG
GSCGMGGGFGGGSGMGGGMGGGGICGMGGSSFGGGSMGGSCGMGGGMYSGGFSSGSGRMC
GSGGGSSSVRRCVTTTSVKSSGVRF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcagtctgtctgcaggagcttcggaggggggagcagaaggggctttagctcc
tgctccgcaattggcggcggctttggaggcggtggccggagcaggagcagctacagctcg
tactctgtgtccaggggattcggaggtggaggacgctgcgggggcttcggcagccggagc
ctccacaacatggggggcagcgccaggatttccatgggcgggtgctacggtggtgggtac
ggcagcaggatgggaggctttggtgggagctatgggggtctcggcagctttgggggcgga
atgggtggaggaggaggaggtggaatgtgtggctttggaggaatgggtggaggaggaatg
ggtggctttggtggtgggatgggtggctttggtggtgggatgggtggtggaggaatgggt
ggctttagtggcccaggctttggcatgggtggacctgggagaggtggccctgggatccag
ccagtgcagattgacacgaccctcctgcgcccggtccatgttgagattgatccccagatc
cagcaagttaaaaaccaggagaaggagcagatcaagaccctgaacaaccagtttgcctcc
ttcattgacaaggtccggttcctggagcagcagaacaaggtgctctccaccaagtgggag
ctgctccagcagcaagggccgtcggggcccaggaagaacctggatgtgatctttgagaac
tacatccagaacctgcggaggcagctggattcaatcctggcgcagcggggccagctggaa
tcagagctgcagaacatgcagcagtacgtcgaggattacaaaaccaagtatgaggaagag
atcaaccggcgcacgacagccgagaatgagtttgtggtgctgaagaaggatgtggacagt
gcctacatgaccaaagttgagctggaagccagggtgggagctctgacagatgaaatcaac
ttcctgaggtgcatctatgaggaggagctggctcagatgcagacgatcagccgggacctg
tccgtggtggtgtccatggacaacaaccggcacctggacctggacagcatcatcgaggag
gtccggcgccagtacgagcagattgcccagagcagccgggctgaggccgaggcctggtac
cagagccagtacgagcagctccagagcacggccggccggcacggggacaacctccgcaac
accaagattgagatccaggagctgaccaggaatgtccagaggctgcgggctgagattgag
aacgtgaagaagcagaaccaacagttgcaggcagccattgctgaggctgaggagaggggg
gagatggctctcaaagatgccaggttgaagctggaagagctggagagtgccctgcagaag
gacaaggaggagctggctcgcctgctgaaggagtaccaggagctgctgaatgtcaagatt
gcactggacgttgagatcgccatgtacaggaagctgctggagggagaggagaacaggctc
tgcaacgacagcatggccaacgttaatgtctctgtggtaggcaggacgactgtctctgga
ggcagaggaggcatgggaggaggattcggaggcagcggcatgggaggaggattcggaggc
ggcagctgcggaatgggaggaggattcggaggcggcagcggcatgggaggaggaatggga
ggaggcggcatctgcggcatgggaggcagcagctttggaggaggcagcatgggcggcagc
tgtgggatggggggaggaatgtactccggtggcttctcctctggaagcggaaggatgtgc
ggctctggcgggggatcctcctctgtgcggagatgcgtcaccaccacctcggtcaaatct
tcgggagtgagattctga
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