Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459176
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Entry
135459176 CDS
T09958
Name
(RefSeq) keratin, type II cytoskeletal 4-like
KO
K07605
type II keratin, basic
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135459176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135459176
04147 Exosome [BR:
zle04147
]
135459176
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
135459176
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
135459176
Exosomal proteins of other body fluids (saliva and urine)
135459176
Exosomal proteins of colorectal cancer cells
135459176
Exosomal proteins of bladder cancer cells
135459176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
CENP-F_leu_zip
TPR_MLP1_2
DUF5344
KIF21A
Motif
Other DBs
NCBI-GeneID:
135459176
NCBI-ProteinID:
XP_064590957
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All DBs
Position
29:294939..301397
Genome browser
AA seq
620 aa
AA seq
DB search
MSRQCYTSGSILGRRGFSSASAVCGLGRANSSSASVCQPVGRRCGIGGFSSRSVCDLGRG
QRISFGGSCRSGVYGGAGVGRCGVAYGGGRFGTVVGFGNCASFGGLGSYRGLGDGVAMGS
YGGGIGIGLGGGRSEGIRGVSIHPELLKPLCVGVDPEECQVRTHEKEQIKNLNNQFACFI
DKVRLLEQQNKVLTTKWELLQQYVLPASRRNLEPVFENFICNLRKQLECVMGERERLENE
ERCLRDLVQEFKCKYEDEINKRTAAENEFVVLKKDVDCLYLTKEELEVRVGLLRQQLEFL
KCIYAEERAQLDCQLCDTSVIVQMDNSRDLDMEGIIKSVECCYEEIAQKSKAEVEAFYQT
RLEELHSSRGKFCDDLKNNQSEIAELNRMIQKLQCESDNVKKQISALQTAICDAEQRGDC
ALKDARQKLVDLQTALQQAKDKMACLLRDYQELLNVKLALDIEIATYRTLLEGEESRICT
GNPVSVAVVSGGGTVGECRSLSGIGGKCTVKSGGAGAGLGMVSSFGSAGFSTRSVDCVPK
VGAGFGARSAVSCVGREVLTGVDGVQCAAGMGNLGNLGNLGSVVCAGVEQCGPGAVLIPG
APGVCGNRFSTAVRVVRTSR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacagtgctacacctccggctccatcctgggaagacgaggcttttcctcggcc
tccgccgtctgcggcctgggcagggccaacagcagctcggcctccgtctgccagcccgtg
ggacggaggtgtgggatcggtggcttcagcagccgcagcgtctgtgacctgggccgaggc
cagaggatttccttcggtggcagctgccgcagcggcgtctacggcggggctggcgtcggg
cgctgcggcgtcgcgtacggcggaggccgcttcggcaccgtcgtgggctttgggaactgt
gcgagcttcgggggcctgggcagctacagaggcctgggggatggcgtggccatggggagc
tacggcggcggcatcggcatcggcctcggcggagggaggtccgagggcattcgcggcgtc
agcatccacccggagctcctcaagcccctgtgcgtgggcgtggaccccgaggagtgccaa
gtgcggacccacgagaaggagcagatcaagaacctcaacaaccagtttgcctgtttcatt
gacaaggtgcggctgctggagcagcagaacaaggtgctgaccaccaagtgggagctgctg
cagcagtatgtgctcccagcatcccggagaaacttggagcctgtgtttgaaaacttcatc
tgcaacctgaggaagcagctggagtgtgtgatgggggagcgagagcggctggagaatgag
gagcggtgcctgcgggacctggtgcaggagttcaagtgcaagtatgaagatgagatcaac
aagcgcacggcagcagagaacgagttcgtggtgctcaagaaggatgtggattgtctctac
ctgaccaaggaggagctggaggtgagggtgggcctcctgagacagcagctggagttcctg
aagtgcatctatgccgaggagagggctcagctggactgtcagctgtgtgacacctctgtc
atcgtgcaaatggacaacagccgggacctggacatggagggcatcatcaaaagcgtggag
tgctgctatgaggagattgcccagaagagcaaggccgaggtggaggctttctaccaaacc
aggctggaggaactccacagcagccggggcaagttctgtgatgacctgaagaacaaccag
agtgagattgctgagctcaacaggatgatccagaagctgcagtgtgagtcggacaatgtg
aagaaacagatctcagccctgcagacagccatctgtgatgctgagcaacgaggagactgc
gccctcaaggatgcccggcagaagctggttgacctgcagacagccctgcagcaggccaag
gacaagatggcctgtctgctcagggactaccaggagctgctcaatgtcaagctggccctg
gacattgagattgccacctacaggacgctgctggagggagaagagagcaggatatgcacc
ggcaaccctgtgagcgtagccgtggtcagcggcgggggcacggtcggggagtgccggtcc
ctgtctggaatcggaggcaaatgcaccgtgaagagcggaggggccggcgcggggctgggc
atggtctcgtccttcggcagcgccgggttcagcacccgcagcgtggattgcgtgcccaag
gtcggggcgggattcggggcccgcagcgccgtcagctgcgtggggagggaggtgctcacc
ggcgtggacggggtgcagtgcgccgccggcatgggcaacctgggcaacctgggcaacctg
ggcagcgtggtgtgcgcgggcgtggagcagtgcgggcccggcgccgtgctgatccccggg
gcgccgggggtctgcgggaacaggttcagcacagccgtgcgcgtcgtcaggacgagccgg
tag
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