Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459205
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Entry
135459205 CDS
T09958
Symbol
DTX3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135459205 (DTX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135459205 (DTX3)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135459205 (DTX3)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135459205 (DTX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-Nse
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-RING_6
zf-RING_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
135459205
NCBI-ProteinID:
XP_064590999
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All DBs
Position
29:796222..803657
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AA seq
320 aa
AA seq
DB search
MGSPVSFVLSRMSGCGAPGAKSRVTVPKRVWEFVTRERAARLALLAQEARVRILVDGETP
ELYVLQLCATPPAPPGGAGLCPARKALKALLKETEKELKKRSQRHGEVLGPRAEPPAGAA
GCPGAGAARDEEPERQCPICLGEMRGPRTLERCRHSFCGECIARALQVRSACPVCGRFYG
QLVGNQPPDGRMLVTRDAALPLPGYEAFGTIIIQYVFPPGVQGVEHPNPGVRYPGTTRVA
YLPDCPEGNKVLGLFRKAFAQRLTFTVGTSLTTGRANVITWNDIHHKTNCTGGPQLFGYP
DPTYLARVQEELRAKGITED
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaccagtgtccttcgtgctctcgaggatgtcgggctgcggtgcccccggtgcc
aagagccgggtgacggtgcccaagcgcgtgtgggagttcgtgacgcgggagcgcgcggcg
cgcctggcgctgctggcgcaggaggcgcgggtgcggatcctggtggacggcgagaccccc
gagctgtacgtgctgcagctgtgcgcgacccccccggcgccccccggcggcgcggggctc
tgcccggcccgcaaggcgctcaaggcgctgctcaaggagaccgagaaggagctgaagaag
cgcagccagcggcacggggaggtgctggggccgcgggccgagccccccgcgggcgccgcg
ggctgtcccggcgcgggcgcggcgcgggacgaggagccggagcggcagtgcccgatctgc
ctgggcgagatgcgcgggccgcgcacgctggagcgctgccgccactcgttctgcggggag
tgcatcgcgcgggcgctgcaggtgcgctccgcctgccccgtctgcggccgcttctacggg
cagctggtgggcaaccagccccccgacggccgcatgctggtcacccgcgacgccgcgctg
ccgctgcccggctacgaggccttcggcaccatcatcatccagtacgtcttcccgcccggc
gtgcagggggtggagcacccgaacccgggcgtgcggtacccgggcaccacgcgcgtggcg
tacctgcccgactgccccgaggggaacaaggtgctggggctgttccgcaaggccttcgcc
cagcgcctcaccttcaccgtgggcacctcgctgaccacgggccgtgccaacgtcatcacc
tggaacgacatccaccacaagaccaactgcaccggcgggccccagctgttcgggtacccc
gaccccacgtacctcgcccgggtgcaggaggagctgcgggccaagggcatcaccgaggac
tga
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