Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459213
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Entry
135459213 CDS
T09958
Symbol
LIMA1
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135459213 (LIMA1)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
135459213 (LIMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
135459213
NCBI-ProteinID:
XP_064591016
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All DBs
Position
29:2961873..2986370
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AA seq
726 aa
AA seq
DB search
MEPSPFNRRQWASHSLKITAKELSLVNKNKSSALAERFSKYQKAAEEATAEKKRSNTENL
PAHLTRGNLSVLKKKWENPVRGSGVGTGRARSPSPGAGAAPGRPQCPGDSAEPRDGGTAE
SCAREPREMEKPEGSERSESPGRIEKYNVPLSKLKMMFEKGEAPQPKQGPREPRRAAGRR
ISENSLEDSDAAQGERSHSTAGYLLDTSPGLSPDKAESRRNLDMPRLSETSIKDRLAKYQ
AAVSKQGSSSGITPMSEIQASESELKNYKSGQKENMAPIEDCSSCQDGEKVSVGENSSSL
HSGLLEDGHAGQSESEAEAQKAVSPKQQNLGAKAAGQAEASPPKAVKKFQLPMKETCVGC
QKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYD
EGFGHKQHKELWAGKTECEESPEKTIHGVNSPDTPQSPGVEDAPIAKVGVLAASMEAKAS
AVPEREERPAETKKLRIAWPPPSDQSTQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDL
DLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPSKEERDTLKRSEELEREVVV
EKKQKEKKVEPRNIQNSGEKNEEEEGELSGIKTAEQNIVENGQMNADTDEEEHATEEPEI
PKEELLEPNSPKHSSLANVVTAKESSPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYE
DDDDDE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagccttccccgttcaatagaaggcaatgggcctcccattctttgaaaatcaccgcc
aaagagctttccctggtcaacaagaacaagtcctcggccctcgccgagaggttctccaag
tatcagaaagctgctgaagaagccactgctgagaagaagagaagtaacacagaaaacctg
cccgctcacttgaccagggggaatctgagcgtgctgaagaagaagtgggagaatccggtg
cggggcagcggggtcggcaccgggcgcgcccgttctccatccccgggggccggagctgcc
ccgggccggccgcagtgtcccggtgacagcgcagagccccgggacggtggcaccgcggaa
agctgtgcgagagagccccgcgaaatggaaaagcccgaaggcagcgagcggtccgagtct
ccggggaggatcgagaagtacaacgtgcccctgagcaagctgaagatgatgttcgagaag
ggggaagcgcctcagcccaagcagggcccccgggagccgcgcagggctgcgggcaggagg
atctcggagaacagcctggaggactctgatgctgcccaaggagagaggagccacagcaca
gcagggtatcttctagacaccagtccaggactcagcccagacaaggcagagagcaggagg
aacctggacatgccccgtttatcagagacatcaataaaggacaggctggccaagtaccag
gcagctgtgtccaagcagggcagttcctcaggcatcactcccatgagtgagattcaagcc
agtgagagtgaactcaagaattacaaatctgggcagaaggagaatatggcaccaattgag
gactgcagttcctgtcaggatggggagaaggtttctgtaggtgagaacagctcatctttg
cactctggtctgctggaggatggccatgctggacagtcggagagcgaggcagaagctcag
aaagctgtcagcccaaagcagcagaaccttggtgctaaagcagctggccaggcagaggcc
tctcctccaaaagccgtgaagaaattccagttgccaatgaaggaaacctgtgttgggtgt
cagaagactgtgtaccccatggaaaggctctttgccaaccagcaggtgtttcacatcagc
tgcttccgctgttcctactgcaacagcaaactcagcctggggacgtacgcctctctgcgt
gggaacatctactgcaagcctcacttcaatcagctcttcaagtccaaaggcaattacgat
gagggctttggacacaagcagcataaggaattgtgggcaggtaaaactgaatgtgaagaa
tccccggagaaaaccatccatggtgtgaattcaccagacactccacaaagcccaggagta
gaggatgccccgattgcaaaagtgggagttctggcagcaagtatggaagcaaaagcttca
gctgtgcctgaaagggaagaaagaccagcagaaacaaaaaagctcaggattgcctggcca
cctccatctgaccaaagtacccaaggaagtgccttagatgagggcatcaaagtactcaaa
cccaagtggcctccagaagaagagatttccaagcctgatgtgcaggaggatgtggatctg
gatctcaaaaagttaagaagatcttcctcgctgaaggagcgaagtcgcccctttacagtt
gcagcctcatttagaacagtatctgttaaaggccataaaacagagaattcaccatctcct
tccaaggaagagagagacacattgaaaaggagtgaggaactggagagagaggttgttgta
gagaaaaagcaaaaggaaaagaaggttgagcctaggaacatccagaactccggggagaaa
aatgaggaggaagaaggggaattgtcgggtatcaaaacagcagagcagaacattgtagag
aatgggcagatgaatgcagacacagatgaggaagaacacgctacagaggagccagaaatt
ccaaaggaagaactccttgaaccaaattctcctaaacattccagtttagccaatgttgtg
accgctaaggaatcatctccaaaccagaaccgcaaatcccaagacgttggtttttgggag
ggtgaagacgtggaagatctgtctgtggaagaacagatcaaaaggaatcgctactatgaa
gatgatgatgatgatgaataa
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