Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459217
Help
Entry
135459217 CDS
T09958
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135459217 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135459217 (SMARCD1)
03036 Chromosome and associated proteins [BR:
zle03036
]
135459217 (SMARCD1)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135459217 (SMARCD1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135459217 (SMARCD1)
PBAF complex
135459217 (SMARCD1)
GBAF(ncBAF) complex
135459217 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
135459217
NCBI-ProteinID:
XP_064591033
LinkDB
All DBs
Position
29:complement(3015147..3021861)
Genome browser
AA seq
511 aa
AA seq
DB search
MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGML
PGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAK
KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRI
FISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL
LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL
LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKI
HETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQ
PWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggccgggttccagtcggggcctgcgagcggcggcggcgccggggccgcg
cccggggccgcgctgggcccgggagcgccgggcggggcggtgcgcatgggcccggcgccg
gggcagggcctgtaccgctcgccgctgcccggagccgcctacccgcgccccgggatgctg
ccgggcggccgcctggcgccgcagggcccggccatgggtcctcccggctacggcgggagc
ccagccgtgcggcccgcgctggcgcaggccgggctggaccaggctcgcaagcggccggcg
ccgcagcagcttcagcaggtgcagccgcaggcggtgcccaaccgcaaccacaatgccaag
aagaagaagatggcagataaaatcctcccacagcggatccgtgagctcgtgcccgagtcc
caggcctacatggacctgctggccttcgagaggaagctggaccagaccatcatgaggaag
cgcctggatatccaggaggctctgaagcgccccatcaagcaaaagcgaaagctgcggatt
tttatctccaacaccttcaaccccgccaagtcggacgcggaggatggcgaaggaaccgtc
gcctcctgggagctgcgggtggaaggacggctgttggaggattctgctctgtccaaatat
gatgccaccaagcagaaaaggaaattttcgtccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctacgact
caggagacagacggcttccaggtgaagaggccgggggatgtgaacgtgcgctgcaccgtc
ctgctgatgctggattaccagcctccccagttcaagctggacccgcgcctggctcggctg
ctgggcatccacacgcagacccggcccgtgatcatccaggccctgtggcagtacatcaag
acccacaagctgcaggacccccacgagcgggagtttgtcatctgtgacaagtacctgcag
cagatctttgagtcgcagcggatgaagttctcggagatcccacaaagacttcatgccttg
ctgatgccccccgagcccatcatcatcaatcatgtgatcagtgttgacccaaatgaccag
aagaaaacagcctgctatgacattgacgtggaggtggatgataccctgaaaactcagatg
aattcctttctgctctccacagccagtcaacaggaaattgctgctctggataacaagatc
catgaaacaattgagaccatcaaccagctgaagacacagcgcgagttcatgctgagcttt
gcccgagatcctcagggcttcatcaacgactggctccagtcccagtgccgggatttgaag
acaatgactgatgtcgttgggaatcccgaggaggagcgcagagccgagttctacttccag
ccgtgggcgcaggaagccgtgtgccgatacttctactccaaggtgcagcagagacggcag
gaactggagcaggccctgggcatccggaacacatag
DBGET
integrated database retrieval system
