Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459281
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Entry
135459281 CDS
T09958
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135459281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135459281
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
135459281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
135459281
NCBI-ProteinID:
XP_064591135
LinkDB
All DBs
Position
Z:11749854..11904558
Genome browser
AA seq
2671 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLPGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGATGGNRTASQETGSAGNGSRPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFMCVPQEDTVGVLKFKPENHPE
IFRKKSDFESQKTDIQQNENRQMEFQQNESRRLESKYNESKQLEVKHESRQMEVKQNENR
QTELKQNESRQMEMKQNEGKQNNGKQEIRQRPETPKQKNEGRPETPKQKSEGRPETPKHK
HDNRRDSSKPLPDKKIEIPRHKLDVKSDPSRMKPENRPDPTKPRPDGRSVSDTPRRDHDS
LKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKPDGSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQESKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKVDSNKAH
GDNKAEFPSYLLGARSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSTKPNKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRRSGHYHEGRRISGSGRYRNRSPDDSDMDDYSPPPSLSEVARKMK
KKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLL
GKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEE
RLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYD
PVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQ
VSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNF
RLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSADKDSNSEEESNKKVDQDVLITNSYET
AMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLV
HQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGDDEIQQLQK
ALLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETT
GQIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIY
LTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVE
LLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMI
RRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQ
NLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSSRLVACITTLFLFS
KIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTIL
TANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAI
IGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADR
DWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSSVRHFALNVIALTLNQGL
IHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINT
CPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIAD
NLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKDRKPSSEEESESDSN
SGSGSESEAEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLL
LMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKI
TEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAET
EDDESDGEDRGGGTSGVRRRRSQRISQRITH
NT seq
8016 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttacg
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagctcgtccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggagatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tcaaattatcaacaaaccactatctcacatagcccttccagtcggtttgtgccaccacag
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatatatgccatattcacatcctccaagttacacagctcatcct
caaatgcagcaagcttccgtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgcctggaaattcagctaatcatcatgctgataattct
agacatggctcaaatgaagactacctacagatggtgcacagactcagtagtgatgatggc
gatccttcaataaggaatgctgcgtctttttccttgagatcaccacagtcagtctgctct
ccagctggaagtgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcacgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctaaagaagcgaaaacaagaaaacaaaccaccagaggctggaggtgctact
ggaggaaatagaacagcttctcaggagacaggttctgcaggaaatgggtcacggccagcg
ctgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacaccatcaaaaaacctgaagaaattaagcagtataatgacgggtttatg
tgtgttccccaagaagacactgttggagttcttaaatttaaacctgaaaaccatccagaa
atttttaggaaaaagtcagactttgaaagtcaaaagacagatatccagcaaaatgaaaac
agacaaatggaattccagcaaaatgagagcagacggttggaaagtaaatacaatgagagc
aagcagttagaagtgaaacatgaaagcagacaaatggaagtgaaacagaatgagaacaga
cagacagaattgaaacaaaatgagagcaggcaaatggagatgaaacaaaatgagggaaaa
caaaataatggcaaacaggaaatacggcaaaggccagaaacaccgaaacagaagaatgaa
ggcagacctgaaacaccaaaacagaagagtgaagggaggcctgaaacacctaaacacaaa
catgataataggagggactccagtaaacctttgccagacaagaaaattgaaatacctagg
cacaaactagatgtgaagtctgatccttcaaggatgaaacctgaaaatcgacctgatcca
acaaaaccgaggcctgatgggcgctcagtttctgatacaccaaggcgtgaccatgacagc
cttaaacaaagatctgaggacaggggggaatcagagagatacagaggagatccatccaag
atcagaaggcctgaatatttgagatcctcaaacaaaaatgaacatgattctaagcatggt
attaaacctgatggttcaaaacctgagaaatttgaaaggaagtataggcatgagtctggt
gattcaaggttttcttctggggatcagaaatcaaggcctgacagccctcgtattaaacag
gaaagtaaaggggattctagcaaatcaagacctgataaacctggttttaagtcaccaaac
agcaaggatgaacgaaggacagatggtaataagagtaaagtagatagtaataaagcacat
ggtgacaataaagcagagtttcccagctatttgttgggggcaagatctggcgcattgaaa
cattttgtcattccaaaaatcaaacgtgataaagatggcaatgttactcaggagtcaagg
aaaactgaatttagaggtgaacataaggacaaagtagagaagattgggctagttgaagat
ctaaataaaggagctaagcctgtagttgtccttcaaaagctttctttggatgatgtgcag
aaatttattaaggacagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcaaccaaacctaataaaggtagcatagatcagtcagtgttgaaggagttgcctcct
gagctcctggcagagattgaatccacgatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagat
aatgacagtgaagaagcttttgaatcttctcgtaagagacacaaaaaggatagagatgaa
gcttgggagtatgaagagcatgacaggagaagttctggtgaccataggagaagtggtcat
taccatgaaggaaggaggatttctggtagtggccgttaccgtaatcgcagtcccgatgac
tccgatatggatgattattcccctcctcctagcctcagcgaggtggctagaaaaatgaag
aagaaagaaaaacaaaagaagaggaaagcttatgaacctaaactaacacctgaagaaatg
atggattcttcaaccttcaaaagatttactgcttcaatagagaatattttggaaaatctg
gaagacatggattttacagcttttggtgatgatgatgagattccacaggaattgctactt
ggcaaacatcaacttagtgagttgggtagtgaatctgcaaaaatcaaggcaatgggcatt
atggacaagctctcaacagataaaacagtaaaagttctgaatattttggaaaagaatatt
caagatggatccaagctttctactttgcttaaccacaataatgacactgaagatgaggag
agattatggcgagatcttattatggaaagagtgacaaaatctgctgatgcttgtcttact
gctatcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaata
gagagagttattcagtacacaaaatttcatttgcagaacactctctatcctcagtatgat
cctgtgtatagagtggatcctcatggtggtggtgttttaagttcaaaagcaaaacgtgcc
aagtgttccactcacaagcaaagagttatagtgatgttgtataacaaagtttgtgacatt
gtcagcagcttgtcagagttgctcgagatacagcttctcactgatacaactattcttcag
gtgtcatcgatgggaataacacctttctttgtagaaaatgtcagtgagctacagttatgt
gccatcaaattagtgactgcagtgttctcccggtatgaaaaacacagacagctaatatta
gaagaaattttcacttcacttgcgcggctaccaactagcaagaggagtttgagaaacttc
aggttaaacagcagtgacactgatggagagcctatgtacattcagatggtaacagcacta
gttctgcaacttattcagtgtgtggtgcacttaccatcagcagacaaggattctaattca
gaggaggaatcaaacaagaaagtggatcaagatgtgcttattactaactcatatgaaaca
gccatgaggacagcacaaaatttcctttctatttttcttaagaagtgtggcagtaaacaa
ggggaggaagattacaggccactgttcgagaactttattcaagatcttctttcaacagtc
aataaaccagaatggccagctgcagagttgctacttagtttactaggaaggctattggtt
caccagttcagtaacaaatccacagaaatggcattaagagttgcatcacttgactatctt
ggaactgtagcagcaagactgaggaaagatgcagtcactagcaaaatggatcaaggctct
ttagccagaatcctcaaacaggtttcaggaggggatgatgaaattcaacagctgcaaaag
gctttactagattatctggatgagaacacagaaattgatgcatcattagtgttttctcgg
aagttttatgtagctcagtggttccgtgatacaactatggagacagaaaaagcaattaaa
tctcagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgagaccaca
ggacaaatcatgcatagagcagaaagtcgcaaaaagtttcttcgcagcatcattaaaact
gctccatctcagttcagcacattaaagatgaattctgatactgtggactatgaagatgca
tgtttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatg
aagtgtttgtctgaggttgttgctgtagatcccagcattctagccaggctggatatgcaa
cgaggagttcatgggcggctaatggataactccactagtgtacgagaagcagctgtggag
ctgcttggccgatttgttctctgtcgtccgcagcttgctgagcagtattatgacatgctg
attgaaagaatactggatactggtatcagcgtcagaaaaagagtcataaaaatacttagg
gatatctgcattgagcagccaacttttcccaaaattacagaaatgtgtgtgaaaatgatt
cggagagtcaatgatgaagaaggcattaagaaattagtaaatgagacattccagaaactc
tggtttactccaactccacaccatgacaaagaagcaatgacaaggaaaatactgaacatc
actgatgtggttgcagcttgtagagatacagggtatgattggtttgaacagcttcttcaa
aatctgttgaagtcagaagaggatgcctcatataaacctgtgaagaaagcctgtactcaa
cttgttgacaatttggtcgagcacattcttaaatatgaagaatctttatcagattctgac
aataaaggtgtgaattccagtcgcttggttgcttgcataaccactttgttcttgttcagc
aaaataaggccccagctaatggtcaaacatgccatgaccatgcagccatacctgaccact
aaatgtagtacccagaatgatttcatggtgatctgcaatgttgcaaagatcttggagctt
gtagtgccgctaatggagcacccaagtgagacctttcttgccactattgaggaagacctc
atgaaactcatcatcaaatatggcatgacagttgttcagcactgtgtgagctgtcttggt
gctgttgtgaacaaggtcacccagaactacaaatttgtgtgggcctgttttaatagatat
tatggtgcactttctaaattaaaaaatcaacaccaagaagaccccaacagtacaatactt
actgccaataaaccagcactccttagatcacttttcactgttggagcactgtgtcggcat
tttgattttgatcaagaagattttaagggcaacagtaaggttaacattaaggataaagtc
cttgaactgctgatgtattttacaaagcattcagatgaagaagtacagacaaaagccatt
attggtcttggatttgcatttatacagcacccaagtttaatgtttgaacaagaagtgaag
actctgtacaacagcattctttcagataagaactgttcagtaaacttaaaaatccaggtg
ttaaaaaacctccagacctacctgcaggaggaagatacacgtatgcagcaggcagacaga
gactggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcaggg
atgagtagttccatcatgcagctatatctcaaacaggtccttgaggctttctttcataac
cagtccagtgtacgccactttgctctaaatgtcattgcactgacattaaaccaaggtctc
atccatcctgttcagtgtgtgccatacttaattgctatgggcacagatccagagccctct
atgcgaaataaagctgaccaacagttggtggaaatagacaaaaaatatgctgggttcatt
cacatgaaagcagtggctggtatgaagatgtcttaccaagtacagcaggcaattaatacc
tgcccaaaagatcctgtgagaggttttagacacgatgaatcatccagtgcgctgtgttca
cacctctactccatgattcgagggaaccgtcaacacagacgagcctttctaatttctcta
ctcaacctctttgatgatactgcaaaaacagaggtgaatatgcttttgtacatagcagac
aatctagcctgttttccgtaccaaacacaggaagagccactgtttataatgcatcatata
gacattacattatcagtttctggtagcaacctactacagtcatttaaagagtctatggtg
aaagacaaaaaaaaggatagaaagccttcatcggaggaggagtccgagagtgacagtaac
agcggcagcgggagtgaaagcgaggcggaagcttctaagcctcggaggttacggaaacga
gtggactctgattcagattctgatgaagaaaatgatataaatgcagtgatgaagtgttta
cctgaaaattcagctcctttaattgaatttgctaatgtctcccaaggcatattattactt
ctgatgctgaaacagcatctaaagaacctctgtggattctctgatagtaaaattcagaaa
tattctccatctgaatctgcaaaagtttatgataaagctataaacaggaagacaggagtg
catttccatccaaaacaaactttggattttctgcggagtgatatggctaattccaagatc
acagaagaagtgaagaggagtatagtaaaacagtacttagatttcaagctccttatggaa
catttggatcctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagaca
gaggacgatgaaagtgatggggaggatagaggaggaggcacttcaggggtgaggcggagg
aggagtcaacgtatttcgcagcgtattactcattga
DBGET
integrated database retrieval system
