Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459413
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Entry
135459413 CDS
T09958
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135459413 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135459413 (CALD1)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
135459413 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
135459413
NCBI-ProteinID:
XP_064591502
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All DBs
Position
1A:complement(3835901..4038485)
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AA seq
733 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERLSYQRNDDDDEEAARERRRRARQERLRQKEEGDVSG
EATEKSEVNAQNSVAGEESKRSLDDEAALLERLARREERRQKRLQEALERQKELDPTITD
GSLSAPSRREVNNVEENATTGKEETETVTKSYQRNNWRQDGEEEGKKEEKDKEEEKPKEE
ENQVDVTAEKPADKEEAVTVNAEEHKAENDTNAVPEGTQSVADEEKAEQERKEAEERERL
KAEEEKRAAEEKQRAEEEKRAAEEKQRAEEEKRAAEEKQRAEEEKRAAEERAKAEEERRA
AEERERAKAEEERRAAEEKQKAEEERRAAEERAKAEEEKRAAEEKAKLEAEKLKEKQKME
EQKIEEEKRQAAALKKQEEEKVEAKKEKLPEEKPQATSIQDQDDKGKAPKEEMKSVWDRK
KAQNGEQEPPASKLKPTENAFGRSGAKGAAEEAKPGAEALKRLEDQRRRRGESESEELEK
LKEKQQEAAAELGELKKKREERRKVLEEEEQKKKQEEAERKIREEEEKRRMKEEIEKRRA
EAAEKRQKMPEDGVSEDKKPFKCLSPKGSSLKIEERTEFLNKSAQKSGMKPTQTTAVVSK
IDSRLEQYTSALGSAKTSRPKASDLHVPAEGVRNIKSMWEKGNVFSSPSGTGTPNKETAG
LKVGVSSRINEWLTKTPEGNKSPAPKPSDLRPGDVSGKRNIWEKQSVEKPGAASKVSATG
KKSETNAGVRQEP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaacgccgcagagagctcaggaggcaaaagcgtgaggaaatgcgcctg
gaagcagagaggctgtcctaccagaggaacgatgatgatgatgaggaggctgccagggaa
cggcgccggcgggctcggcaggagaggctgaggcaaaaggaggaaggagatgtctcagga
gaagccacagagaaatctgaggtcaatgcccagaacagcgtggcaggagaggaaagcaag
cgctccttggacgatgaagccgcgttgctggagaggctggcgaggcgggaggagaggcgc
cagaaacgcctgcaggaggccctggaacggcagaaggaattggaccccacgatcacagac
gggagcttgtcagcgcccagcaggagagaagtgaacaacgtggaagaaaacgcgaccacg
gggaaagaggagactgaaacagttaccaaatcctaccagaggaacaactggaggcaagat
ggggaagaagaggggaaaaaagaagaaaaagacaaggaggaggagaaaccaaaggaggag
gaaaatcaggtagatgtgacagcagaaaaacccgctgataaagaagaggcagtaactgta
aatgcagaggaacacaaagcagagaacgatacaaatgctgtgccagaagggacgcaaagt
gtagcggatgaggaaaaggccgagcaggaaaggaaggaagcagaagaaagggagaggtta
aaagcagaagaagaaaagagggcagctgaggaaaaacagagagcagaggaagaaaagagg
gcagctgaggaaaaacagagagcagaggaagaaaagagggcagctgaggaaaaacagaga
gcagaggaagaaaagagggcagctgaggagagggcaaaggcagaggaggagaggagggca
gctgaggaaagggagagggctaaagctgaagaggagaggagggcagctgaggaaaaacag
aaagcagaggaggaaaggagggcagctgaggaaagggcaaaggcagaagaggaaaagagg
gcagctgaggaaaaggctaagctagaggcagagaaattaaaggaaaaacaaaagatggaa
gaacagaaaatagaagaagaaaaacgtcaagcagctgccttaaaaaagcaggaggaagaa
aaagtggaagctaaaaaggaaaagctgccagaagagaagccccaagctacctccatacaa
gatcaggatgacaaaggtaaagcccccaaagaggaaatgaaaagtgtctgggatcgcaag
aaggcgcagaatggggaacaggagccccctgcctccaaactgaaacccactgagaatgct
tttgggcgctccggcgcgaagggcgccgccgaggaggcgaagccgggcgcggaggccctg
aagaggttggaggatcagcggcgccgccggggcgagagcgagagcgaggagctggagaag
ctgaaggagaagcagcaggaggcggcggcagagctgggcgagctgaagaaaaagcgggag
gagcgccggaaagtcctggaggaagaggagcagaagaagaagcaggaggaggctgagagg
aaaatcagagaggaggaggaaaagaggaggatgaaggaagaaatcgaaaaaagaagggct
gaagctgctgagaaacgccaaaagatgccagaagatggtgtgtctgaagacaagaagcca
tttaaatgtttgagtcctaaaggttcatctctcaagatagaggagcgaacagaatttttg
aacaaatctgctcaaaagagtggaatgaagcccacccagacaacagcagttgtctccaag
attgacagtagacttgagcaatacactagtgcacttgggagtgcaaagacttcacgacct
aaagcctccgacctgcacgttccggccgagggcgtccgtaacatcaagagcatgtgggag
aaagggaatgttttctcatcaccttctgggacaggaacaccaaataaggaaactgctggg
ctgaaggttggtgtctccagtcgtatcaacgagtggttgaccaagaccccagagggcaac
aaatcccctgctccaaaaccttctgatttaagaccaggagatgtctctggcaaacgtaat
atctgggagaagcagtcagtggagaagccaggtgctgcttctaaggtatcagctacaggg
aaaaaatcagagactaatgcaggtgtgagacaagaaccctag
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