KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459444
Entry
135459444         CDS       T09958                                 
Symbol
ATG12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04068  FoxO signaling pathway
zle04136  Autophagy - other
zle04140  Autophagy - animal
zle04621  NOD-like receptor signaling pathway
zle04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:zle00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    135459444 (ATG12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    135459444 (ATG12)
   04136 Autophagy - other
    135459444 (ATG12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    135459444 (ATG12)
   04622 RIG-I-like receptor signaling pathway
    135459444 (ATG12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zle04131]
    135459444 (ATG12)
   04121 Ubiquitin system [BR:zle04121]
    135459444 (ATG12)
   03029 Mitochondrial biogenesis [BR:zle03029]
    135459444 (ATG12)
Membrane trafficking [BR:zle04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    135459444 (ATG12)
Ubiquitin system [BR:zle04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   135459444 (ATG12)
Mitochondrial biogenesis [BR:zle03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    135459444 (ATG12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 135459444
NCBI-ProteinID: XP_064591576
LinkDB
Position
Z:complement(64345078..64349531)
AA seq 143 aa
MAEPEEQPSPAAAQSGGRSDGGEEAAEGGAAAGPGEPGPPPAGSPGTEEPAGDAKKKIDV
LLKAVGDTPIMRTKKWAVERTRTIQGLVDFIKKFLKLMASEQLFIYVNQSFAPSPDQEVG
TLYECFGSDGKLVLHYCKTQAWG
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggagcccgaggagcagccgtcgcccgccgcggcgcagagcggcggcaggagcgac
ggcggggaggaggccgcggagggcggggccgcggcggggcccggagaaccgggcccaccc
ccggcagggtcgccgggcaccgaagagcccgccggcgacgcgaaaaagaaaattgacgtg
ctgctgaaggccgtgggcgacacccccatcatgaggaccaagaagtgggcggtggagcgg
acccggaccatccagggcctcgtggatttcatcaagaagttcctgaagctgatggcctcc
gagcagctgttcatatacgtaaaccagtcttttgctccgtctccagaccaggaagtgggg
accctctatgagtgttttggaagtgatggcaagcttgtactgcattattgcaaaactcag
gcatggggatga

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