Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459447
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Entry
135459447 CDS
T09958
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135459447 (DDX4)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135459447 (DDX4)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135459447 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
135459447
NCBI-ProteinID:
XP_064591580
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All DBs
Position
Z:29222323..29248031
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AA seq
748 aa
AA seq
DB search
MEEDWNAEIGDEALLPSLEKVSLLERPNDTSPVFNSSVDSFGTDEFVNSQHQPVSSFGRG
RNFAAKGFQEGIEEDAITKNRGFKGFGQGFQERNTVDGASTQNRGFKGFRGGFGQGDSFQ
AGNGEDAVTQNRGFKGFRGAFGQGFQERNAVDGASTQNRGFKGFRGGFGQGTKDGQRGIP
QSGALSFRERGTLTDGAGFQQGIEEDAITQNRGFKGFGQGFQERNAVDGASTQNRGFKGF
RGGFGQGGRGRQRDVPQSGTPDSRERGILTDGAGPKVTYVPPPPPDDEQAIFARYQTGMN
FDKYDENVVEVSGLDPPAALMSFADTNMCHTLTVNIAKAGYSKPTPVQKYSIPIILAGRD
LMACAQTGSGKTAAFLVPVVAQMMRDGVTASSFKEQQEPECIITAPTRELINQIFLEARK
FVYGTCIRPVVIYGGTQTDYSIRQVKQGCNILCATPGRLLDIIGRGKIGLHNVKYLVLDE
ADRMLDMGFGADMKKLVSFPDMPQKEKRQTLMFSATFPEEVQRLACEFLKTDFLFVVVGH
AGGACSDVQQNILQVSQYFKRDKLIEILHSIGNERTLVFVDTKKKADFIACFLCQENIPA
TSIHGDREQREREIALQDFRSGKCPVLVATSVAARGLDIENVQHVINFDLPSTIEEYVHR
IGRTGRCGNTGKAVGFFDNNSDGHLAQPLIKVLSDAQQEVPVWLTEVAFETEGGRLPVNT
QKNYRGRGNVNAGEVKMDCSAREIESWD
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagactggaatgcggagataggggatgaggcgttactgccatcccttgagaag
gttagcttgcttgagagaccaaatgacacctcacctgtctttaattcaagtgtagactca
tttggtactgatgaatttgtgaactcacagcatcagccagtgagtagttttggcagagga
agaaattttgcagccaaaggttttcaagaaggaattgaagaagatgccattacaaaaaac
agaggctttaaaggatttggacaaggttttcaagaacgcaacactgtagatggtgctagt
acacaaaacagagggtttaaaggatttcgtggtggttttggacaaggtgacagttttcaa
gcaggaaatggagaagatgctgttacacaaaacagagggtttaaaggatttcgcggtgcc
tttggacagggttttcaagaacgcaacgctgtagatggtgctagtacacaaaacagaggg
tttaaaggatttcgtggtggctttggacaaggtaccaaagatggacaaagaggtatacct
cagtctggagctctcagctttagagagagaggaactctaacagatggtgcaggttttcaa
caaggaattgaagaagatgccattacacaaaacagaggctttaaaggatttggacaaggt
tttcaagaacgcaatgctgtagatggtgctagtacacaaaacagagggtttaaaggattt
cgtggtggctttggacaaggtggtagaggtaggcaaagggacgtacctcagtctggaact
cctgattctagagaaagaggaattctcacagatggtgcaggtccaaaggtgacttatgtg
ccccctcctccacctgatgatgaacaagccatctttgcacgttaccagacaggaatgaat
tttgacaagtatgatgaaaatgttgttgaagtgtcaggactggaccctccagcagcatta
atgagttttgcagacacgaatatgtgtcatactttaactgtgaacattgctaaagccggg
tactctaaacctactccagtgcagaagtacagcatccctattatactggcgggacgggat
ttaatggcatgtgcccagacaggatcaggaaaaactgcagcatttcttgtaccagttgtg
gcccagatgatgagggatggtgtaactgccagcagctttaaagagcagcaagagccggaa
tgtattattactgccccaactagagaactgataaatcagatcttcctagaagcaaggaaa
ttcgtgtatggaacttgtataaggcctgttgtgatctatggaggtacgcagacagactat
tcaattcgtcaggtaaagcaaggctgtaatatactgtgtgccactccaggaaggcttcta
gacatcattggaagaggaaagattggcttgcataatgtgaaatatttggtgctagatgaa
gcagaccgcatgcttgatatgggttttggtgcagatatgaagaagttggtgtctttccca
gacatgccacaaaaagagaaacgccaaacactaatgtttagtgccactttccctgaagaa
gttcagaggctagcttgtgaatttttgaaaaccgattttttatttgttgttgttggacat
gcgggtggagcatgtagtgatgttcagcaaaatattcttcaagtttctcagtatttcaag
agggataaactgatagaaattctacacagcataggtaatgaacgaactctggtctttgtg
gacacaaagaaaaaagcagacttcattgcttgctttctttgtcaagaaaatataccagcc
actagtatccatggagatagagaacagagagagcgagaaatagcacttcaggattttcgt
tctggaaaatgtccagttcttgtggcaacctcagtggcagcaagaggtctggacattgaa
aacgttcagcatgtcattaattttgatcttccttccaccatcgaagagtatgtacaccga
attgggcgaactggtcgttgtggaaatacagggaaagcggttggcttctttgataacaat
tcagatggtcatcttgcacaacctctaattaaagtgctttcagatgctcagcaggaagtt
cctgtttggttgacagaagttgcttttgagactgaaggaggacgactcccagttaatacc
caaaagaattacagaggcagaggcaacgtgaatgcaggagaagtaaagatggactgttct
gcaagagaaattgagtcatgggattaa
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