Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459459
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Entry
135459459 CDS
T09958
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04068
FoxO signaling pathway
zle04110
Cell cycle
zle04120
Ubiquitin mediated proteolysis
zle04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135459459 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
135459459 (SKP2)
04150 mTOR signaling pathway
135459459 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135459459 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135459459 (SKP2)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135459459 (SKP2)
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Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_6
F-box_5
Motif
Other DBs
NCBI-GeneID:
135459459
NCBI-ProteinID:
XP_064591606
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Position
Z:11440036..11453429
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AA seq
442 aa
AA seq
DB search
MLQGSPSCVWCQSGITLRASGFCCVCRKHLQEIPSSSTNVSTSLEWDPGKTSELLSGMGV
SALKKDKLGNENTPQDLLVSSPCLPPKRQKVKDNEKDFVIVRRPWLLREAESGISLDALP
DELLLAIFAYLPLKDLLKVSMICKRWHRLSFDESLWQTLDLTGGNLLPGVLGQLLPAGVT
VFRCPRSCVGDPLFKTSNLLKIQHLDLSNCTVSAADLHSILCLCEKLQNLSLEGLVLSDS
IIKSIARNPNLIRLNLCGCSGFSAEALELMLSSCSMLEELNLSWCEFTATHVKAAVNHVT
SKITQLNLSGYRENLQIADVKTLVERCPLLVHLDLSDSMMLKPECFQYFKQLVFLQHLCL
SRCYQISPAALVELGEIRTLKTLQVFGIVTDSSLQLLEEALPDMKINGSHFTSIARPTVG
NKKSHEIWGIKCRLTLRNPSFL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagggatccccatcctgtgtttggtgtcagtctggcattaccctcagagcctct
gggttttgctgtgtctgcagaaagcacctccaggagatcccatcctctagcactaatgtt
tccaccagcttggaatgggaccccggcaagacctcggagcttctctcgggtatgggagtg
tcggcccttaagaaagacaagctgggcaatgaaaacacaccccaggacctgctggtgtcg
tcaccctgtctgcctccaaaaaggcagaaggtgaaggacaacgaaaaggactttgttatc
gtgcgccggccatggctgctccgagaggcagagtcaggtatttctttggatgcactgcca
gatgaattgcttctggcaatctttgcctatttgcccctaaaggatttactgaaagtttct
atgatttgcaagagatggcatcgactttcatttgatgaatctctctggcagactcttgat
ttgactggtgggaatctgctgccaggagtgcttggacagttgttgcctgcaggtgttact
gtgttccgctgcccgaggtcttgcgttggggatccgttgtttaaaacaagcaatcttctt
aaaattcaacacctggatttgtcgaactgcacagtgtctgctgcagatctccacagtatt
ctctgtctgtgtgaaaagctgcagaacctcagcttggagggtctagtgctttctgacagc
atcatcaagagcattgctagaaatcccaatttgatacgactaaatctctgtgggtgctca
gggttttctgcagaagccttggagctgatgttgagcagttgttctatgctggaggagctg
aacctgtcctggtgtgaattcacagccactcacgtcaaagcagcagtcaatcatgttact
tcaaagatcacccaattaaatttaagtggatacagagagaatctacaaatagcagatgtg
aaaacgctggtggagagatgtcctttgcttgtccatttagatctcagtgacagcatgatg
ttaaagcctgagtgcttccagtattttaaacaacttgtgttcctacaacacctgtgcctt
agccgatgttaccagatatcacctgctgccttagtagagcttggtgaaatccgaacactg
aagactcttcaggtatttggaatagtcactgatagctccctgcagctcctcgaggaagca
ctacccgacatgaagatcaatggttcacactttaccagcattgcaaggccaactgttggc
aataaaaagagccatgagatttggggcatcaaatgcagattgacactgagaaatcctagt
ttcttgtga
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