Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459525
Help
Entry
135459525 CDS
T09958
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
zle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135459525 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
135459525 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135459525 (LSM5)
03041 Spliceosome [BR:
zle03041
]
135459525 (LSM5)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135459525 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
135459525 (LSM5)
Spliceosome [BR:
zle03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135459525 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
135459525
NCBI-ProteinID:
XP_064591748
LinkDB
All DBs
Position
Z:complement(64205981..64271842)
Genome browser
AA seq
91 aa
AA seq
DB search
MAASAVSNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagtgcggtgtccaacccgtcccagctcctgccgctcgaacttgtggacaag
tgcatcggttcacgtatacacatcgtgatgaagagcgacaaagaaattgttgggacactt
ctaggatttgatgactttgtcaatatggtgctggaagatgttacggaatttgagatcaca
cctgagggcagaagaatcacaaagctggaccagattctgctcaatggaaataacataact
atgctggttcctggaggagaaggacctgaagtatga
DBGET
integrated database retrieval system
