Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459608
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Entry
135459608 CDS
T09958
Symbol
RIC1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135459608 (RIC1)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
135459608 (RIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
135459608
NCBI-ProteinID:
XP_064591885
LinkDB
All DBs
Position
Z:39522284..39570063
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AA seq
1423 aa
AA seq
DB search
MYFLSGWPKRLLCPLESLERPLHIQTDPQRAFFAVLFPSQLSIWYCRPSVLIVSYKELSK
AASQFGPYKQAEWRPDSTMIAVSTANGYILFFEIPSARDKYLYEPIYPKGSPHLKGTPHY
KEEQCAPSLNLEMKKVLDLQSSITSLQSMLEDLLVATADGFLHLIHWDGMTNGRKAINLC
TVPFSVDLQSSRAGSLMGFEDVYIRDMEYCATLDGFAVVFNDGRVGFITPMSSRFTAEQL
HGVWAQDVVDGTCVAVNNKYRLMAFGCANGSVQVYTIDTTTGAMQFSHKLELTPKQYPDI
WNKTGPVKLIRWSPDSCVVMVTWECGGLSLWSVFGAQLICTLGGDFAYQSDGAKKDPLKI
RSMTWGSEGYHLWVIDGSSSSNMKPERNANNEAQQFGILQFQFIKSALTVNPCMSNQEQV
LLQGEDRLYLNCGDAAQTQSPRNTLAHSEHNHTRERGPFSDGSLDSQGLSTLLGHRHWHV
VQIHSTYLESNWPIRFSAIDKLGQNVAVVGKFGFAHYSLLTKKWKLFGNITQEQTMMVTG
GLAWWNDFIVLACYNLNDHQEELRIYLRTSNLDNAFAHITKVQANTLLLSVFRDIVILFR
ADCSICLYSIERRSEGLNPTASIQILQEVSMSRYIPHPFLVVSVTLTSVRTETGITLKMP
QQACEAESIMLNLAGQLIMLQRDRSGPQIRDKDNNPNQRKHLPFCAPVVLAQSVENVWTT
CRINKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLF
EDALVLGAVNDTVLYDCLYTQTSAREHLEVLFPFSIVERTSQIYLHHILRQLLVRNLGEQ
ALLLAHSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVH
CARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLF
NTALEQGKWDLCRHMIRFLKAIGSGETETPPATPTTQEPSSSSGFEFFRHRSISLSQSAE
NLHSKFNLTKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEEIKLKDLGCFAA
QLGFELIGWLCKERARAARVEDFVCALKKLHKDFLWPFPVIPASSINSPFKNGKYKTAVG
EQLLKSQSTDTFVNMEMDTGISNTPRSRSWLGTISSSQREIDTVSSHGPHMQDAFLSPLL
SKVFLIGDECSIGSATDLTETSSMVDGDWTMVDENFSSLSLTQSELEQLSLELASKGPHK
SQVQLRYLLHIFMEAGCLDWCVVIGLILRESSVINQVFSIMQSSDIDGEICQNIKTGLDA
VDKWASTDCPGYKPFLSIIKPQIQKLNEIVEEQVQPEAFQPVNPSKVPEQANPRAEESRT
SSSHGTNPQSDAGSSNASRHEEDKAKTEDEDSFQEGSYDCVVS
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctcagcggctggcccaagaggctcttgtgtcctctggagtccctggagcga
ccgcttcacatccagacggatccccagagagctttcttcgccgttttgttcccatcgcag
ctaagcatctggtactgcagaccaagtgtattaatcgtaagctacaaggaactttcaaaa
gcagcttctcagtttggaccttacaaacaagcagaatggcggcctgacagcacaatgata
gctgtttcgactgcaaatggatacatcttattttttgaaatcccatcagcaagagacaag
tatctttatgagccaatatatcctaaaggaagtcctcatctgaaggggaccccacattat
aaggaagaacaatgtgctccttcattaaatctagaaatgaagaaagtgctggacttgcaa
tcctctatcacaagtttgcagtccatgttagaagatctacttgtggctactgctgatgga
tttctccatctcattcactgggatgggatgaccaatgggaggaaggccatcaacctatgt
acagttccattttctgtagatctgcagtcttctcgagcaggttcacttatgggatttgaa
gatgtttacatcagagatatggaatactgtgccacgcttgatggctttgctgttgttttt
aatgatggcagagttggtttcattacaccgatgtcaagtagattcactgctgagcaactc
catggtgtttgggcacaagatgtagttgatggaacttgtgtggcagtgaataacaaatac
aggctaatggcatttggatgtgccaatggctctgtgcaggtttatacaatagataccacc
actggcgccatgcagttttctcataaattggaactgacaccaaaacaatatcctgatatt
tggaataaaacaggacccgttaaactaatcagatggtcacctgatagctgtgttgtgatg
gtgacttgggaatgtggaggtttgtccttatggagtgtttttggtgctcagcttatctgt
actttaggaggcgattttgcgtatcaatctgatggtgccaaaaaggaccctctaaaaatc
cgttccatgacctggggatcagaagggtatcatctctgggttattgatggcagttcttct
tcaaacatgaaacctgaaagaaatgcaaataatgaagctcagcagtttggtattctgcag
tttcagttcatcaagagtgcactcactgttaatccttgtatgagtaaccaggagcaagtc
ctccttcaaggagaagatcgcttatatttgaactgtggagatgcagcacagactcagagt
cccagaaatactttggcacactctgaacataaccacaccagggaaagaggccctttttca
gatggcagtttagattctcagggtttaagcactttactaggacaccggcattggcatgtt
gtacagattcacagtacatatctagagagcaactggcctataaggttttcagctattgac
aagcttggacagaatgtagctgttgttggcaagtttggttttgcacattattctttactc
accaaaaaatggaagctgtttggaaacattacccaggagcaaactatgatggtaacaggt
ggcttagcatggtggaatgacttcattgttcttgcatgttataatttaaatgatcaccag
gaagagctaagaatctacctgcgaacgtctaaccttgacaacgcgtttgctcatatcacc
aaagtgcaggcaaacacattactactgagtgtcttccgggacattgtgatattgttcaga
gcagattgttccatttgcctttacagtattgagagaaggtctgagggtcttaatcctact
gccagtatccaaattcttcaagaagtatccatgtctcggtacattcctcatccttttctt
gtagtatctgttacgttgacatcagtgagaacagagactggcatcaccttgaagatgcct
cagcaggcttgtgaagctgaaagtattatgcttaacttagcaggacaacttatcatgttg
caaagggatcgatctggaccccagatacgagataaagataacaatcctaatcaaagaaag
catctgcctttttgtgctccagttgtcctagcccagtctgttgaaaatgtatggactact
tgcaggattaataaacagaaacgccacttactggaggctctgtggctcagctgtggtggg
gcaggtatgaaagtctggcttcccctgtttcccagagatcatcgaaaaccgcattccttt
ctgtcaagacggatcatgctgcctttccacatcaacatatacccattggctgttttgttt
gaagatgccttggttcttggtgctgttaatgacactgtgctctatgactgtttatacact
caaaccagtgctagagaacacttagaggttctctttccgttctccattgttgagagaacc
tctcagatctacctccatcacattttacgccagctcttggttaggaacctcggtgaacaa
gccttgcttttggcccactcctgtgccacattaccatacttccctcatgtactagaactg
atgctccatgaagtgctggaagaagaagctacctcgcgggaacctattcccgaccctctc
cttcccactgtggcgaagttcattacagaattccccctcttcctgcagacagttgttcat
tgtgctaggaagacagaatatgccctgtggaattacctttttgctgctgttggaaacccg
aaggacttatttgaagagtgcttaatggcccaggacttggacacagctgcctcttacctt
attatcctacagaatatggaagttccagcagttagcagacaacacgctactctcctgttt
aatactgccttagagcagggaaagtgggatctctgtcgtcatatgattagatttcttaaa
gccattggctctggagaaacagaaacacccccagctacaccaacaactcaggaacctagt
tcaagtagtggttttgaattcttcaggcatcgcagcattagtttatcccaatcagcggag
aatctccatagcaaatttaatctgacaaaaacactgagtatgccctctggcccatctgga
aaaaggtggagtaaagacagcgactgtgctgagaacatgtacattgacatgatgctctgg
cggcatgctcggcgtctgctggaggaaatcaagctgaaagaccttggctgctttgctgca
cagctgggctttgagctgatcggctggttgtgcaaggagcgagccagagctgcccgggtg
gaggattttgtgtgtgctttgaaaaagctacacaaggatttcctctggccatttccagtt
ataccagcttcatccattaattcacctttcaagaatggaaagtacaagacagctgtgggg
gaacaactactaaaatctcagtctacagacacctttgtaaacatggaaatggacacaggt
atttcaaacacacctcgcagtcgtagctggcttggtactatcagctcttctcagagagaa
attgatactgtttcatcccatggaccacacatgcaagatgcattcctttctcctttgcta
agtaaagtgtttttgataggtgatgaatgcagcattggttcagcaacggacctgactgaa
acaagttccatggtggatggagactggaccatggtggatgaaaacttctccagtctaagt
ttaactcagtcagagcttgagcagctctctctggagctggcaagtaaagggccacacaag
tcacaggtgcagctccggtatttgctacatatcttcatggaagcaggatgtctggattgg
tgtgttgtcataggccttattctcagagaatcttcagttatcaaccaggttttcagtatc
atgcagtcctctgatattgatggagaaatctgtcagaatattaagactggcctagatgct
gttgacaagtgggcttctacagattgccctgggtacaagccatttctaagtatcatcaaa
ccacagatccagaaactaaatgaaatagtagaagagcaagtacaaccagaagcatttcag
ccagtgaatccatctaaggttcctgaacaagcgaacccaagagctgaggaaagcaggact
tcctctagccacggcactaatcctcagagtgatgctggaagcagcaatgcaagcagacat
gaagaggacaaggctaagacagaggatgaggattcattccaagaaggcagttatgactgt
gttgtgtcttaa
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