Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459739
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Entry
135459739 CDS
T09958
Symbol
RNF170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135459739 (RNF170)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135459739 (RNF170)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135459739 (RNF170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
Prok-RING_4
DpnI_C
FYVE_2
zf-ANAPC11
zf-RING_10
Sina_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
135459739
NCBI-ProteinID:
XP_064592102
LinkDB
All DBs
Position
Z:56225618..56250138
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AA seq
273 aa
AA seq
DB search
MTYSYAIYLIKISRAVMASHQAEVQSLKLDNDSVIEGVSDQVLVAVVLSFTFIAALVYTL
LRNEHQNIHPENQELVRALRQQLQTDQQDATAGDRHRFYTDMSCPVCLQQATFPIETNCG
HLFCGSCIIAYWRYGSWLGAIRCPICRQTVTLFLPLFGEDQQGAAQVFQDVNDYNRRFSG
QPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIFLCLIGALLYLASPLDFLPEALF
GILGFLDDFFVIFLLLIYISIMYREVVTQRLNR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacctattcctatgcaatttatcttataaagatttcaagagctgtgatggccagtcac
caagcagaagttcagagtttgaagctagataatgattcagttatagaaggagtaagtgac
caggtactggtggcagttgtgctcagtttcactttcattgctgctctggtatatacgctt
ttaagaaatgaacatcagaacatacacccagaaaatcaagagctagtgcgagctcttcgt
cagcagcttcagactgatcagcaggatgctactgctggtgatcggcatcgcttctataca
gatatgtcgtgtccagtctgtttgcaacaggctacgtttcctatagaaacaaactgtgga
catctcttctgtggttcctgcattattgcctactggaggtatggctcatggctgggtgcc
atccgctgtccgatctgcagacagacggtaacactattcttaccactctttggtgaagat
cagcagggtgcagcccaagtgtttcaagatgttaatgattacaatcgaagattttcagga
cagcccagatcgattatggaaagaattatggatctccccactttattgcgacatgctttc
agggagatgttttctgtagggggcctcttctggatgtttcgcatcaggatattcctctgc
ttgattggagccttgctgtacctggcttcacctctggattttcttcctgaagctctgttt
ggaattctggggttcttggatgatttctttgtcatttttctgctgctgatatatatctct
atcatgtacagagaagtggtaacacagcgtctaaatagatga
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