Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459894
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Entry
135459894 CDS
T09958
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135459894 (TOPORS)
03036 Chromosome and associated proteins [BR:
zle03036
]
135459894 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135459894 (TOPORS)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135459894 (TOPORS)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135459894 (TOPORS)
UBL E3 ligases
135459894 (TOPORS)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
135459894 (TOPORS)
Cilium and associated proteins [BR:
zle03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135459894 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
PWI_Topors
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
135459894
NCBI-ProteinID:
XP_064592414
LinkDB
All DBs
Position
Z:complement(62585082..62590455)
Genome browser
AA seq
1047 aa
AA seq
DB search
MADPSRRLAEGARRRRPPGEERREPPGAGRCRTRHRLKAAAALARTESQGPAVNMTSDKE
FAENSSFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAE
CPLCKQPFFSIFHTIRAEDDFKEYILSPLETSSFASPDGRRFRYRTTLTRERRARGSPSR
RMPSPPDNGMLFEGLSSEPARHRHREIQQMLRRLASRRKASAEGRSLRQIQEEDMITFRR
ALYRTGVRIRSIQDGGRYREISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLINIVQH
IIMSNVTRYDLESQAFADDLKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANYDCPAPS
YEEGSHSDSSIITISPDVAYPQGPDNSLSVPGLGQAPWDDETPGPSYSVSEEVRATIASP
LESSESSDEDSASGSRRTKLQTELQANADSNDSGSSSDNCVIVGYVKPLAERTPEVVELS
SDSEESIKEEKREEVKKQRPVQCHSWSDSEPSRSFSPHSPTYREDVGSCRSCLSPAVEKM
ESKGDEKNKYKRKDLPPQDLSWSPSPGSDTVCSPWNHRLSKKGKSRSPQSCSRDSRSSHG
HRSKREHHSKSQLKKRRSRSRDSSKHKSKRSSRKSRAHDSRASLKSQRGSLSGESTPSRE
VSRSRSRSKGHSKRRSRSRDSDRYYVRDSYQSRHQWGSAFCSRKVFGDSYESSSRRKTRS
NTLYSRQSASPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNRSRTPSGGNDR
MKSEKPGGKRKYKTRHLENTFMESTSLERENESKKTSSKFGDYCKNEDSLSDNRASSETK
RKKRKKKMRSPSVEIVYEGKATDTMRHLKKKKKKHKKKHRKHHTNSSVHSSPVVITIDSD
SSSKEPESTEWDSSITWTGTTQINERENESPSSFLRRTGCGETAEVDKKYDIPDTRENLD
GGVRDADVKLQETAADQSVTTVSTSSNTSHTETVTSYVQEAPAAPSSQLPSPRTSFLECP
EREPLILRLPKRLVNRSSWFDFPEEKM
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgtcccggcgcctggcggagggtgcccgccgccgccgcccgccaggggag
gagcggcgggagcctcccggcgccgggcgctgccggacgcgccacaggctgaaggcggcc
gcggccctggcccgcacggaaagccagggcccggcggtgaacatgacatcagataaggag
tttgctgaaaatagcagtttttctccgaaagccagcaccagtaagctgccgacagatgcg
tctcccgactccaagtgccccatctgcctggacagatttgacaacgtggcatatctggat
cgctgcttgcacaggttctgcttccgctgcgtgcaagagtggtccaagaacaaagcagaa
tgcccgctctgcaagcaacccttcttctccattttccacacaattcgtgctgaagatgac
ttcaaggagtacatcctcagccctttagaaacaagctcttttgccagccccgacggccgg
aggtttcgttaccgcaccaccttgacgagggaacgccgcgcgcgcggttccccttcccga
aggatgccgtcccctccggataacgggatgttgtttgaagggctgtcgagcgagccggcg
cgacacaggcacagggagattcagcagatgctcaggaggctggcctcaaggaggaaggcc
agcgcggagggcagatctctgaggcagatccaggaggaggacatgatcaccttccgcagg
gctctgtaccgcactggcgtgcgcatccgcagcatccaggacggtggccgataccgagag
atttcggccgagttcttccgccgcaaccctgcttgccttcaccgcctggttccttggctg
aagcgagagcttacggtcctgtttggtgcccacgggtctctgatcaacattgtgcagcac
atcatcatgagcaacgtaaccaggtacgatctggaaagccaggcctttgctgacgacctg
aagccatttctgctgaatcggacagagcacttcctgcacgaattcatcagttttgctcgt
tgtccttttaacttagaagcatacgatcaacacgccaattatgactgtcctgccccgtcg
tatgaggaaggaagccactcagactcatcaattattacaatatctcccgatgtggcgtac
ccgcaagggccggataatagtttgtctgttcctggccttggtcaggccccgtgggatgat
gaaactccggggccttcctattccgtttcagaagaggttcgtgcaaccatagcttctcct
ctggagtcatcagaaagttctgacgaggactctgcttcagggagccgaagaaccaagctg
cagactgagttacaggccaatgctgactcaaacgacagtggctcttcctcagacaattgt
gtcattgttgggtacgttaagccgctggctgagaggaccccagaagtggtcgagctgtcc
tctgactctgaggagtccatcaaggaagagaaaagggaagaggtcaagaaacagcgacca
gttcagtgtcacagctggagtgacagtgaaccaagcaggagcttctcaccacattcccca
acatacagggaggatgtaggaagttgtagaagctgtttatctcctgcagttgaaaagatg
gaatcaaaaggggatgagaagaacaaatacaaaagaaaagatctgcctccacaggacttg
agttggagcccctctccagggagtgatacagtatgctccccttggaatcacagattgtct
aaaaagggaaagtctagaagcccacagtcctgttcacgggacagtcgaagcagccatggc
catcggtctaaaagggagcaccatagcaaaagccaacttaaaaagagacgatcgagaagc
agagatagtagcaaacataagagcaaaagaagcagcagaaaatcaagggctcatgacagc
agagcctctctgaaaagccagaggggctctctaagtggtgagagcactccatccagagaa
gtgagccgatcacgttcacgcagcaaaggccacagtaaaaggagatcaagaagtagagac
agtgatcgctactatgtaagagacagttaccaaagtagacaccagtggggttctgctttc
tgtagtcgaaaggtgtttggagacagctatgaatcctccagcagaaggaagacccggtct
aacactctttactcgcggcaatctgctagtccagaatacaggatacgatcatttattgag
aggacagatctgcatagccagaggggactccatgagagacactattactgttacgaaaga
tgcaggtcaaggagtcggtcaagcaacagatcaaggactccttctggaggaaatgacaga
atgaaaagtgaaaagcctggtggaaaaaggaagtacaaaactcgccacctggagaataca
ttcatggaaagcacaagtctagaaagagaaaatgagtccaagaaaacttcctcaaaattt
ggtgattactgcaaaaatgaagatagcctgtcagacaatcgtgcaagcagtgagacaaag
cgtaagaaaaggaagaagaaaatgaggagtccaagcgtggagatagtctatgaaggaaaa
gcaacggacacgatgaggcatcttaaaaagaaaaagaagaagcataagaagaaacaccgg
aaacatcacacgaatagctcagtacattcttctccggtggtgattacaattgatagtgat
agtagtagcaaggaaccagaaagtaccgaatgggacagcagtattacatggacaggcaca
actcaaataaatgagagggaaaatgagtctccatcttcttttctaaggaggacaggatgt
ggggaaactgcagaagtagacaaaaagtatgatatccctgacacaagggaaaacttagat
ggtggcgttagagatgctgatgtcaaacttcaggaaacagcagctgatcagagtgttacc
acagtgagtaccagcagtaacacctctcacacagaaactgtaaccagttatgttcaggaa
gcaccagcagcgccttccagtcaactgccttcccccaggacttccttcctagagtgtcca
gagagagagccattgatactgcgacttccaaagagacttgtcaacagatcctcatggttt
gatttcccagaagaaaaaatgtag
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integrated database retrieval system
