KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459900
Entry
135459900         CDS       T09958                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zle01009]
    135459900 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zle03036]
    135459900 (KDM5A)
Enzymes [BR:zle01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     135459900 (KDM5A)
Protein phosphatases and associated proteins [BR:zle01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     135459900 (KDM5A)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135459900 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 135459900
NCBI-ProteinID: XP_064592425
LinkDB
Position
1A:5922664..5971728
AA seq 1692 aa
MAGGGGLRYAAEFVPPPECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPP
FACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDLYGL
SKIVANKGGFEVVTKEKKWSKVASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
IQKPNLDLKEKVEAEDLSSDAQASPKQASRMNVMLKRTRRVKSQAEAGEMSRNTELKKLQ
IFGAGPKMMGLALGAKDKEDEVTRRRKGTRSEAFGMQMRQRKGTLSVNFVDLYVCLFCGR
GNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREY
TLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSG
FPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAHINADISGMKVPWLYVGMCFSSFC
WHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVMKELAPELFESQPDLLHQLVTIMN
PNVLMEHGVPVFRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSH
YRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLLIEEETRLRESVVQMGVLMS
EEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPMQKKCLRYRYP
LEDLPSLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLF
RRLRDAVKEAETCASVAQLLLSKKQKHSRVSQDSGRTRTKLTMEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMIDEIPDSSKLQELIDMGSGLYVELPELPRLKQELQQ
ARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEAIQNGSNYAYL
EQLESLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYSLLQVLSPRTDI
GVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGLEEARDAAAVVALFKEREQKEIEA
MHALRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHSGCVPLPKSSSQKKG
SSWQAKEVKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSA
FNRVIGSVSSSPRQTLDYDDEETDSDEDIRETYGYDIKDNASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSGTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEDLMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSMDEKPLKMRGRD
SSERKRKRKLERAEQFFGDMKQKSKELKKLEKPKKKKLKLTMDKTKELNKLAKKLAKEEE
RKKKREKAVVAKVELAKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKPLQGPSSPAHASPPPFLLS
YKLPMEDLKETS
NT seq 5079 nt   +upstreamnt  +downstreamnt
atggcggggggcggcgggttgcgctacgcggccgagttcgtgccgccgcccgagtgcccc
gtgttcgagcccagctgggaggagttcagcgacccgctcggcttcatcggccgcatccgc
ggcctggccgaaaaaaccggcatctgcaagatccggccccccaaggactggcagcctcca
tttgcatgtgaagtgcaaagttttcgtttcactccacgaattcagcgcctgaatgaactg
gaggcaatgacaagagtgaaactggacttcttggatcaattagcaaaattttgggaactc
caaggatccaatttaaaaatccctgtggttgagagaaaaatactggatctgtatggtttg
agcaagattgttgccaacaaaggaggctttgaagtagtgaccaaagagaagaaatggtct
aaagtggcgagcaggcttggctacctgccagggaagggcacgggctccttgctcaagtct
cactacgaacggatcctgtatccctacgagctcttccagtccggggtcagcctcatgggc
attcagaagcctaacttggatcttaaggaaaaagtggaggctgaggacctcagttcagat
gcccaagcttccccaaagcaggcttcaaggatgaatgttatgctgaagagaaccaggcgt
gtcaaatcccaggcagaggctggagaaatgagtagaaacaccgaactaaagaagctgcag
atctttggagctggacccaaaatgatgggactggcattgggagcaaaggataaagaggat
gaggtgacgcgaaggcgcaagggcaccaggtcggaggcgtttgggatgcagatgcggcag
cgcaaaggaaccctctctgtcaactttgttgatctctatgtttgcttattttgtggtaga
ggaaacaatgaggataaactgctgctgtgtgatggatgtgatgacagctatcacaccttc
tgcctgattcctcctcttcctgatgtacccaagggtgactggaggtgtcccaagtgtgtt
gctgaggaatgcaacaaaccccgagaggcctttggatttgaacaagctgtcagggaatat
actctccagagctttggtgaaatggctgataacttcaagtctgattatttcaacatgccg
gtccatatggttcccactgagctggtagaaaaagaattctggagattagtgagcagcata
gaggaagatgtaattgtggagtatggggctgatatctcatccaaggactttgggagtggc
ttcccagtgaaggatggccggcgaaagctgatgccagaggaggaggattatgctctgtct
ggttggaacttgaacaacatgcccattctggagcagtcagtccttgctcacatcaatgca
gacatctctggcatgaaggtgccctggctgtatgtggggatgtgcttctcctccttctgc
tggcacattgaggaccactggagctattccatcaactacctgcactggggagagcccaag
acgtggtatggtgtgccctctcatgcagcagagcagctggaagatgtgatgaaggaattg
gctcctgagctgtttgagtcccagcctgatctcctgcatcagctggtcactattatgaac
cccaatgtgctgatggaacatggtgtaccagttttcaggacaaatcagtgtgctggagag
tttgttgtgacctttcctcgtgcctatcactctggatttaaccagggatataactttgct
gaagctgtgaacttctgcactgctgactggctgcccattggacgccagtgtgtgagtcac
taccggaggctgggccgtcactgtgtgttctcccatgaagagctgatcttcaagatggct
gcagatcctgagtgcctggatgtagggctggctgccatggtctgcaaggagatgactctg
ttgatagaggaggagacacgcctgagggagtctgttgtacagatgggggtgttgatgtct
gaggaagaggtgtttgagctggttccagatgatgaacggcagtgcacagcctgcagaacc
acgtgcttcttgtcagctctgacgtgctcctgcaatcctgagcgcctggtgtgcttgtac
catccttctgatttatgcccctgtcccatgcagaagaagtgtctaaggtaccggtaccca
ctggaagaccttccttctttgttgtatggagtgaaggttagagcccagtcctacgacact
tgggtcagtagagttacagaggctctgtctgccaatctcaaccacaagaaagatgtgatt
gagctgagagtaatgttggaggatgctgaagataggaaatacccagagaacgatcttttc
cgcaggctccgagatgctgtgaaggaagcagagacctgtgcttcagtagcacagctgctt
ctgagcaaaaagcaaaaacacagcagagtgagccaggacagtggaaggacacggaccaag
ctgacaatggaggagcttaaagcatttgtgcagcagctgttcagcttgccctgtgtcatc
agccaggcccgacaagtcaagaatctgctcgatgatgtggaagagtttcatgagcgtgct
caggaagccatgatcgatgagatcccagactcttccaagctgcaggagttgatagacatg
ggctctggcctttatgttgaacttcctgagctgccaaggttgaagcaggagctgcagcag
gcacggtggctggatgaggtgaggtccaccctcttggatccccagagagtcaccctggac
gtgatgaagaagctgattgactctggtgtgggcttggcaccacatcacgctgtagaaaaa
gccatggctgagctgcaggagctgctcacagtctcagagaggtgggaggagaaggccaag
gtctgtctgcaggccagaccacggcagagtatgatggctctggagggtatcgtgaacgag
gccaagaacatccctgcgtacctgcccaacgtgctggcactgaaagaagccctgcagcga
gccagagactggactgccaaagtggaggccattcagaatgggagcaactacgcctacctg
gagcagctggagagcttgtctgccaagggccggcccatcccggtgcgcctggacgcgctg
ccccagctcgagtcccaggtggcggcagctcgcgcctggagggagcgcacgggaaggacc
ttcctcaagaagaattccagctacagcctgctacaggttctgagcccacggactgatatc
ggtgtttatgggagcagtaagaacaggaggaagagggcaaaggagttgatggagaaggaa
aaggagaaagatcttgacttggaatccctgagtgaattggaggatgggctggaggaggcc
agggatgctgcagctgtggtggctctgttcaaggagcgggaacagaaggaaattgaagcc
atgcacgctctcagggcagccaacttggccaagatgaccatggtggaccggatcgaggaa
gtgaagttctgtatctgccgcaagacagccagcggcttcatgctgcagtgcgagctgtgc
aaggactggttccacagcggctgcgtgcccctgcccaagagcagctctcagaagaagggc
tccagctggcaggccaaggaggtgaagttcctgtgtcccctgtgccagcgctcgcgccgg
ccgcgcctggagaccatcctgtcgctgctggtgtccctgcagaagctgccggtgcggctg
cccgagggggaggcgctgcagtgcctgacggagcgagccatgagctggcaggaccgggcg
cgccaggccctggccaccgacgagctctcctctgctctggccaagctctccgtgctcagc
cagcgcatggtggagcaggcggctcgcgagaaaacagagaaaatcatcagtgcggagctg
cagaaggcagcagctaacccggacctgcaggggcacttgacaagtttccagcagtcagcc
tttaacagagtgatagggagtgtgtcctcatccccacggcagactttggattatgatgat
gaagagacagactctgatgaagacatcagggagacatatggctatgacataaaggacaat
gccagtgtgaaatcctccagcagcttggagcccaatttgttttgtgatgaggaaatcccc
attaaatcagaggaggtggtgacacacatgtggactgctccctccttctgtgctgaacac
gcctattcctctgcttctaaaagctgctctcaaggttctggcactccaaggaagcagccc
cgcaagagcccgctggtacctcgcagcctggagccccccgtgctggagctgtcccctggg
gccaaggctcagctggaggatctgatgatggtgggagatctgctggaggtgtctctggat
gaaactcagcacatctggaggatcttacaggccactcatccgccctctgaggacaggttt
cttcatgtcatggaggatgacagcatggatgaaaaaccactgaaaatgagagggagggac
tcttctgagaggaagcggaaacgaaaactggagagagcagagcagttctttggagatatg
aagcaaaaatctaaagagctgaaaaaactggaaaaacccaagaagaagaagctaaaactc
actatggataagaccaaggagctgaacaagctggcaaagaaactggccaaggaagaggag
cggaagaagaagcgagagaaggcagttgtggcaaaggtagaactggccaaggagagcaca
gagaaaaagagagagaagaaggttctggatattccttccaagtatgactggtcaggagca
gaggagtcagatgatgagaatgctgtgtgtgctgctcagaactgccaaaggccctgcaag
gacaaagtggactgggtgcagtgtgacgggggctgtgatgagtggttccatcaggtgtgt
gttggggtgtccccagagatggctgagaatgaggattacatctgtataaactgtgcaaag
aagcccctgcaggggcccagcagccctgcccacgcctcacctcctcccttcctgctgagc
tacaaactaccaatggaagatctcaaggagacgagttag

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