Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459905
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Entry
135459905 CDS
T09958
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135459905 (DENND4C)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135459905 (DENND4C)
BRITE hierarchy
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
135459905
NCBI-ProteinID:
XP_064592431
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All DBs
Position
Z:complement(45756300..45829269)
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AA seq
1949 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSTGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKDRIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLLFRYPQENYESFPLSDSVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQSQLGLLTTVE
RKVITSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKNTNWKQFPKKPCKSLLSTLKKLHQQLAAVHRKTQEGS
AVEMTPIEADFSWHKKMIELEMLIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDVDSVEDTRLIELDESQKSEHTVFIMPPEPPADDGQDRVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGNSISNSPALMAKRTKQEIKTAHKLAKKYYVSPSQWAKCLFSHS
YSLWFICLPAYVRVAHPKVKALQQAYDVLIKMRKTEVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESSWPSGNRSGIFLWTKVRNVVHGTVQFRQCL
KKSMQIPQVPVIPVLRTPTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSVDNHS
STGGQSDQGYRSKDELLRDGEDSLPATETHIEKDISSNLEDLIGEISTEKSYEKQQLNIE
TPSPADPPAWGNSIVKVPSGIFDSNGRKGSDETVSSPLFITQDSVEDSVFGDVSPKKTSE
KRQKRQKLFSERSCSFSSESRAGMLLKKGSLDLHSKEIAIMMGADAKILTAALSGTKTSP
KSHSFENITDQQVSDMSGTWSGVTQSDWDLEHRSSPVLEEPGEGQEDLENGRDGNMTTVE
DINLEQSAESENQKPESKDATAKRNSFYGVVKPIEREDVEVGLDPLSLLATDSTQPGYPE
SGEKLMSPVAARNLADEIESYMNLKNPLGSKFPSMELHKPDKEAEASGTLGHSQERRSSL
PLDPILPSSKCYESRRSPSVCRSKTFTVRSKQQAHPQVQKERSSSLTGLARSSPHGSLGT
VVTTLSSLKLDNILSGPKIDVLKSSMKQAASVASKMWGVVTSAYSYSDDEEESHRPDYNF
PVGFEDSILGDNLSSRTGVSGLLTNELAQSTTSLGSSSSGGDVGRQHYSAGEVSFPKSMK
LLDSEKSEHSSSHNTSLSSIFQNYAMEVLMSSCSQCRACDALVYDEEIMAGWTADDSNLN
TTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEQKLLTSPAA
ADLISFSDHLQSSHTIAEETSCAAEQGDLAEEQTTDPIAMTTHASNPPKRGVSLTRSHSV
GGPLQNIDLSQRPSHGISTVSLPNSLQEAVDPLIKQQNPAPVSVPYLSPLVLRKELESLL
ENEGEQVIHTSKFINQHPIIFWNLVWYFQRLDLPSNLPGLILTSEHCNEGVQLPLTSLAQ
DSKLVYIHLLWDNINLHQEPGEPLYISWRNLNSSEKKPSTLAEDQRATNTLLESIKLSIQ
HNDVMKPINLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLALKKLPE
EILEKMQRIDAPPSSRVECCRKWFGAPLI
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgggtggctgactatttcgtagtggcagggctcactgat
acagacacggcaaccctcctggaccaagaaatcagccgacatgaaacaaagtcaactggt
cccaaggctccaattactgacattgctgtgataattaaatcagctggcgaaactgtccca
gagggatatacctgtgttgaggccacccctacagccctccaagccaacttaaactatgga
agtctaaagagtcctgaactttttctgtgctacaagagaggccgggacaagccacctctt
actgacatcggagttctctacgaggggaaggaccgcataatttcgggctgtgaggtgatc
caagctactccgtatggtcgttgcgccaacgttaacaacagctcagcttcctcgcaacgc
atcttcatcacctaccgaagggcccctccagtgcggccccagaactcactggcagtgaca
gatatctgtgttattgttaccagcaaaggggaaacccctcctcacacattctgcaaagtg
gataagaatttaaattgtggtatgtggggttccagtgtatacctttgttacaagaagtct
gtgccagcttctaactctttagcatataaagctggcttacttttcagatatcctcaagag
aactatgagtcatttccactgtcagactctgtacctctcttctgccttcctatgggagct
actattgaatgctgggaccctcaaaccaaatatccactaccagtattctcaacatttgta
ctgacctgctcttcagcagaaaaggtttacggtgctgctatccagttttatgagccttat
ccccgggagctgctaacagaaaaacagcaatcacagctgggtcttctgacgactgtagag
agaaaagtgattacttccaagtccatcaattcaaacaaatgcatctgtcttctctcacac
tggcctttctttgaagcgtttcgaaaatttcttatgttcatctacaaactctctgtctct
ggacctcatcctcttcccattgaaaagcatatatcccattttatgcacaatatacctttc
ccttcaccacaaaggccaaggattcttgtgcagctttctgcccatgatgcattaatattg
tcacagccagtttctacaccattgccattaagtggagcaaactttagcactctactcatg
aatcttggaccagaaaactgtgccactctgttactctttgtattactagaaggcaagatc
ctcctccattcccttagaccggctgtgttgacaggagtggctgaagctgtagtagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgatctgtac
gatccaccacaggatattgtgtgcattgacttagacacaaacatggtctacatatcagat
gataagaagaataccaactggaagcagttccctaaaaagccatgtaaaagtcttctcagc
accttaaagaaactgcaccaacagcttgcagcagttcacaggaagactcaagaaggctct
gcagtggaaatgactcctatagaggcagatttctcctggcataagaagatgatagaactt
gagatgttgatccaggaagcatttctccgtttcatggcatctattttgaagggttacaga
acattcctcaagccaatcacacaggcaccttcaaataaagcaactgctgctgattcattg
tttgatcatcaaggatttttaaaaagcagagaccgggcctatacaaagttttacacgcat
ctcaccaagacacagatattcagccgctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataaaggaacg
gaaaaaggagagaaggttgacgtagattctgttgaagatacacgcttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgttcataatgccacccgaaccaccagctgatgat
ggacaggaccgagtaccaaaatacagctataaaaacttcccgcggctagatttcaagctc
tttgacaggccacaggagctcaagctctccttcagcagacacccagctggaaacagcatt
tcaaatagtccagcactcatggcaaagaggacaaaacaggagataaaaacagcccataaa
ttagccaagaaatattatgtaagcccctcccagtgggctaagtgtctcttcagtcatagt
tacagcctatggtttatttgcctgccagcctatgtcagagttgcacatcccaaggtcaaa
gcactgcaacaggcatatgatgttctgattaaaatgaggaaaactgaagtggaaccacta
gatgaggtctgttacagagtagtaatgcagctctgtggactgtggggtcagcctgttcag
gctgtgagagttctttttgaaatgaaaaatgctggaatacagccaaatgccatcacctat
ggttattacaataaggcggttttagagtcttcttggcctagtggtaaccgcagtggcata
ttcctgtggacaaaggtacgaaatgtagttcatggcacagtgcagtttaggcagtgcctg
aagaaatcaatgcagatcccacaagtgcctgtgataccagttctgcggactcccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacaccctcttcgtcagtgacttagtcaggcttgattccgttgataatcactct
agcacaggtggtcaatcagaccagggttacagatccaaggatgaactcttgagagatggt
gaggatagtcttcctgcaactgaaacacacatagagaaagatatttcttctaaccttgaa
gacttaataggagagatttctacagaaaaatcttatgaaaagcaacagctgaatatagaa
actccgagtccagctgatccacctgcttggggtaacagtatagtgaaagttccatcaggc
atttttgatagcaatggaaggaagggcagtgatgaaacagtttctagcccactgttcata
actcaggattcagttgaagattcagtctttggtgatgtttctcctaagaagacaagtgaa
aaaagacagaagagacaaaaactgttttcagagagaagctgcagtttcagtagtgaaagc
agggctggaatgctgctgaaaaaaggcagcttggacttgcattctaaagaaatagcaatc
atgatgggagcagatgccaagatcttaacagcagctttatctgggaccaaaacttcacct
aaatcccacagctttgaaaatatcactgaccagcaggtttctgatatgagtggcacttgg
agtggtgtgactcagagtgattgggacctagaacataggtcttcaccagtgctggaagaa
cctggggaaggacaggaggatcttgagaatggaagagatggaaacatgactacagtggaa
gacataaatcttgagcaatcagctgagtctgaaaaccagaaacctgaatccaaagatgca
actgctaaaagaaatagcttttatggagtggttaagcctattgaaagggaagatgttgaa
gttggcttggaccctctgtctttgctagctactgacagcacacaaccaggttatccagaa
tctggggaaaagttgatgtcaccagttgcagcacgtaatttggcagatgaaatagagagc
tatatgaatttgaagaaccccttgggtagtaagtttcccagcatggaactgcacaagcca
gataaggaagcagaagcttctggtacacttggtcactctcaagaacgaaggtcaagcctg
cccttggatcccatcctgccgtcctccaagtgttatgaaagtcgaagaagtccttctgtc
tgcagatccaaaacattcactgtacgatcaaagcaacaagctcacccacaagttcaaaag
gagcggtcgtcatctttgacaggactggctcgttcttccccgcatggctcactgggaact
gtcgtaacaactttatccagtctgaagttagacaatatactgtctggaccaaaaattgat
gttttgaaatcaagcatgaagcaggctgccagtgtggccagtaagatgtggggagtggta
acatcagcatatagttactcagatgatgaggaagaaagccatcgaccagactataacttc
cctgtgggctttgaagatagtattttaggagataatctgtcatcaagaactggagtctca
ggcctacttacaaatgagcttgcacaaagcactactagtcttggtagtagcagcagtggt
ggagatgtaggaagacagcattacagtgcaggtgaagtttcattcccaaaaagtatgaaa
cttctagattctgagaaatcagagcacagctcttcacataatactagtttatccagcatt
ttccagaactatgcaatggaggtcctgatgtcaagctgctctcaatgtagagcttgtgat
gctttggtttatgatgaagaaatcatggctgggtggacagcagatgactcaaacctgaac
actacctgccctttttgcaaaagtaccttcctacctttgcttaatgttgaatttaaagac
cttcgtggctctgcaagctttttcctgaagcaaagtacctcaggagatagtttacagagt
ggcacccttccattaaccacagaccctctggagcagaaactgttgaccagtccagctgct
gctgacttgatcagtttttcagatcacctgcagtccagccacaccatagctgaagaaacc
agctgtgcagctgagcagggtgatttggcagaagaacagactacagatcccatcgccatg
accacacatgccagtaatcctccaaaaaggggcgtgtccttgactcggagccacagtgtg
ggaggtcctctgcaaaacattgatctctcccagagaccgtcccatggcatttcaacagtt
agtcttcccaacagtttgcaggaagctgtggatcctttaataaaacaacagaaccctgcc
cctgtatctgtaccctacttgagccctttggtactgcgtaaggagcttgaatcactcctg
gagaatgagggagagcaagtaattcatacatccaaattcatcaatcaacaccccataatc
ttctggaacctagtctggtatttccaacgcttggatctgcccagcaacttacctggactc
attctgacatctgagcactgcaatgagggagtgcagcttcctttgacatctcttgctcaa
gatagcaagcttgtatacatccatcttctgtgggacaatatcaacctccaccaagagccg
ggggagcccctgtatatatcttggagaaatctcaattcttctgaaaagaaaccctccaca
ctggcagaagatcagcgggcaacaaacacattgttagagagcatcaaactaagtattcaa
cacaatgatgttatgaagccaatcaacctcctcctacagaaagttaagccagatgtgaaa
cgacaaaggagtttttacagagaaattcttttcctgtctctggtgtctcttggaagagaa
aacattgacattgaggtctttgatagtgaatacagacttgcacttaaaaaacttccagag
gaaattcttgaaaagatgcagagaatagatgctccaccaagcagcagggttgagtgttgc
aggaagtggtttggagcacctttaatataa
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integrated database retrieval system
