Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459943
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Entry
135459943 CDS
T09958
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135459943
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135459943
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135459943
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
zf-C2H2
DUF6244
Dicty_REP
TagA
Zn_SUZ12
TFIIA
PFF1_TM
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
135459943
NCBI-ProteinID:
XP_064592511
LinkDB
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Position
Z:56087748..56132923
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AA seq
559 aa
AA seq
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MRVLWVRPVLGSVTSTASLPRAEPALARQPPREGRRPVGELPLPPAARPGREEEGEGAGA
GAGKAPARPPPSLVRQGRSGAGGGASGRRGPESPCHGAREAVAAGSAPRRASEEAGGGGE
GGGGRPAPRRLLCFRPLPGPTPAPLLSHRGGGGGRGRSGARAARGSPETGLGRRLWTRMS
RHEGVSCDACLKGNFRGRRYKCLICYDYDLCATCYESGATTTRHTTDHPMQCILTRVDFD
LYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPN
HVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTTSSPGGLS
SSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQHAQ
AARQQLETARNATRRTNTINVSTTMTQSTTTTNTSNTENSQQTIQNSQFLLTRLNDPKMS
EAERQSMESERADCSLFVQELLLSTLMQEESSSSDEDERGEIADFGAMGCVDIMPLDVAL
ENLNLKESNKGNEPPPPPL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcctttgggtcaggccggtgctgggttccgttacctcgaccgcctccttgccc
cgggcggagcccgccctggcccggcagcccccgcgggagggccgccgccctgtcggggag
cttcctcttcctccagcagcgcggccggggcgggaggaggaaggggaaggggcaggggca
ggggccgggaaggctccagcgcggccgccgccgtcgctggtgcggcaggggcggagcggc
gcgggaggcggcgccagcggccggcggggcccggagtcaccgtgtcacggcgcccgggaa
gccgttgccgccggatccgccccccgcagggcgagcgaggaggcaggaggaggaggagaa
ggaggaggagggaggccggctcctcgccgcctcttgtgttttcgcccccttcccggccca
accccggcccctctcctctcgcaccggggcggcggcggggggcgaggccgcagcggcgcc
cgagctgcccgcgggagccccgagacaggcctggggcgccgtctctggactaggatgtcc
cgacatgaaggtgtcagctgtgatgcatgtttaaaaggaaattttcgaggtcgccggtac
aagtgtttaatttgctacgattacgatctgtgtgcaacttgttatgaaagtggtgcaaca
acaacaaggcatacaactgaccatcccatgcagtgcatactaacaagagtagattttgat
ttgtactatggtggagaagctttctctgtagagcagccacagtctttcacttgtccttat
tgtgggaaaatgggttatacggaaacatctcttcaagaacatgttacttccgagcatgca
gaaacatctacagaagtgatttgtccaatatgtgcagcattgcctggaggggatccgaat
cacgtaacagatgactttgcagctcatcttacactggaacacagagctcctagagattta
gatgaatccagtggtgttcggcatgttcgtaggatgttccacccaggccggggtttggga
ggaccccgcgctcgtagatcaaacatgcactttactaccagttcccctggtgggctttcg
tcttctcagagttcgtattctccaagcaatagagaagccatggatcctatagctgagctt
ttatcccagctatcaggtgtgaggcgttctgcaggaggacagctcaactcctctggccct
tctgcttctcagttacagcagctgcagatgcagctgcagttggaacgacagcatgcacag
gcagcgagacagcaactggagactgcacgcaatgcaaccagacgcaccaacacgatcaat
gtcagcaccactatgacacaatccacaacaacaaccaacacgtctaacacagaaaacagt
cagcagactatccagaattcccagttccttctgacaaggttgaatgatccgaagatgtca
gaagcagagcgtcagtcaatggagagcgaacgggcagactgcagcctgtttgttcaggag
cttctattgtccactctgatgcaggaagaaagttcttcctcagatgaagatgagcggggg
gagattgcagattttggtgctatgggttgtgtagatattatgcctctagatgttgcttta
gaaaacctaaatttaaaagagagtaataaaggaaatgagcctcctccacctcctctttga
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