Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460052
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Entry
135460052 CDS
T09958
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04120
Ubiquitin mediated proteolysis
zle04144
Endocytosis
zle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135460052
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135460052
09144 Cellular community - eukaryotes
04530 Tight junction
135460052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135460052
04121 Ubiquitin system [BR:
zle04121
]
135460052
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135460052
Membrane trafficking [BR:
zle04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135460052
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
HECT type E3
135460052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
135460052
NCBI-ProteinID:
XP_064592743
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All DBs
Position
Z:308620..371329
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AA seq
993 aa
AA seq
DB search
MATAATEPVYGLSEDEEESRILRVKVVSGIDLAKKDIFGASDPYVKLSLYVADENRELAL
VQTKTIKKTLNPKWNEEFYFRVNPTNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDP
TMERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQEEENSDQRDDSEHGWDVVDSS
DAASRQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLIDVGSESDNNIRQIN
QEAAHRRFRSRRHISEDLEPEPAESGDIPEPWETISEEASASGDSLSLSLPPPPASPVSR
TSPQELSEELSRRLQVTPDSNGEQLGSLIQREPSSRLRSCSVTDAVAEQSQLSLQNGPSR
RARSSTVTGGEEPTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLA
EDGMVGPGTSSSNHLSEPQIRRPRSLSSPTVTLSAPLEGMKDSPVRRAVKDTLSNPQSPQ
PSPYNSPKPQHKGAQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKFPVHLRSKAS
LNPNDLGPLPPGWEERIHLDGRTFYIDHRSQVLICGDIDTRDLVPSYDNKITQWEDPRLQ
NPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPD
VLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLC
NEDHLSYFTFIGRVAGLAVYHGKLLDGFFIRPFYKMMLGKPITLKDMESVDSEYYNSLKW
ILENDPTELDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQK
QMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQHTIYKNGYCPNHPVIQW
FWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPDKLPRAHTC
FNRLDLPLYESFEDLREKLLMAVENAQGFEGVD
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcggcgacggaaccggtgtacgggctctcggaggacgaggaggagtctcga
atcctcagggtgaaggtggtttctggcatcgatctggccaagaaggacatctttggagcc
agtgacccgtatgtgaaactttccttgtatgtagcagatgagaacagagaacttgctctt
gtgcagacaaaaactatcaaaaagaccctgaaccctaaatggaatgaagagttttacttc
agagtaaacccaaccaaccatcggctcctgttcgaggtgtttgatgaaaacagactgacc
cgagacgacttcctgggccaggtggatgtgccgctcagtcacctcccgactgaagaccca
accatggagaggccgtacacatttaaggatttcctcctcagaccaagaagccacaaatct
cgtgtgaagggtttcttgagactgaagatggcgtatatgcccaaaaatggtggccaagag
gaagaaaatagtgatcagagggatgactctgagcacggctgggacgtggtggattccagc
gatgccgcgtctcggcaggaggagctgccgcctcctccgctgccccctggctgggaggag
aaggtggacaacctggggagaacctactacgtgaaccacaacaacaggagcacccagtgg
caccggcccagcctcatcgacgtgggctccgagtcagataacaacatcagacagataaac
caagaggcagctcacaggcgcttccgctctcggcgccacatcagcgaggatttggagcca
gagcctgcggagagtggagacattcctgagccttgggaaaccatttcagaggaggcaagt
gccagtggggattccttgagcttgtcactgccacctcctcctgcatctccggtgtcccgg
accagtcctcaggagctgtctgaggagctgagcagaagactccaggtcactcctgattcc
aatggggaacaactcggctctttgattcaaagagaaccttcctcacgactgaggtcctgc
agtgtgacagacgcagtcgctgagcagtcccagttatccctgcagaatggtccctctagg
agagctcgttcttcaactgtcacagggggagaggagccaacgccttctgtggcttacgtg
cacaccacgccgggcttgccttcaggctgggaggagcgcaaggacgccaagggccggacc
tactacgtcaaccacaacaaccggaccacaacgtggacacggcccatcatgcagctcgcc
gaggacggcatggtggggccgggcacgagcagcagcaaccacctgagcgagccgcagatc
cggcggccccgcagcctgagctcgcccaccgtcaccctgtcagcgccgctcgagggcatg
aaggactctccggtgcgcagggcggtgaaggacaccctgtccaacccccagtccccacag
ccgtccccctacaactcccccaagccccagcacaagggggcccagagcttcctgcccccg
ggctgggagatgcgcatcgcccccaacggccgccccttcttcatcgaccacaacaccaag
accaccacctgggaggatccacggctgaagtttccggtgcatttgagatccaaagcgtct
ctgaaccccaacgatttgggccctcttcctcctggctgggaggaaagaatacacctggat
ggaagaacattttatatagaccatagaagccaggtgttgatatgtggagacattgatacc
agagacttagtgccctcctacgataataaaattacccagtgggaagaccccagactgcag
aacccagccatcacaggcccagcggtgccgtactccagggagttcaagcagaaatacgac
tatttccgcaagaagctaaagaaacctgctgacatacccaacagatttgagatgaaatta
cacagaaataacatttttgaggagtcctacagaagaatcatgtctgtgaagagacctgat
gtactaaaagccaggctctggattgaatttgagtcagaaaaaggacttgactatggaggt
gtggccagagaatggttttttctcttgtccaaggagatgtttaacccttactatggtctc
tttgaatactcagcaacggacaactatacacttcagattaatcctaattcaggtctctgt
aacgaagaccatctgtcgtacttcacgttcattggccgggtggccggcctggccgtgtac
cacgggaagctgctggacggcttcttcatcagacctttctataagatgatgctgggcaag
cccataacgctgaaggacatggaatcagtggatagtgaatactacaactctctgaagtgg
atcctggaaaatgaccctacagagctggatctcatgttctgcatagacgaggaaaacttt
ggacagacatatcaagtggacctgaagcccaatgggtccgaaatcatggtaacaaatgaa
aacaagagggaatacattgacctggtcatccagtggcggtttgtcaacagagtgcagaaa
caaatgaatgcctttctggagggattcacagagctgcttcctattgatctgattaaaatt
ttcgatgaaaatgaactggagttactgatgtgtggccttggcgatgtggatgtcaatgac
tggagacaacacaccatctacaaaaacggttactgcccaaatcatcctgttatccagtgg
ttctggaaggctgttctgctgatggatgctgagaaacggatccggctcctgcagtttgtg
actgggacgtcacgcgtgcctatgaacggatttgctgaactttacggttcaaatggtcct
cagctgtttacaatagagcagtggggaagtcctgataagctgccccgggctcacacctgc
tttaaccgcctagacttacctctgtatgaatctttcgaggacctgcgggagaagctcctc
atggccgtggagaatgcccaagggtttgaaggggtggattaa
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