KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460082
Entry
135460082         CDS       T09958                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135460082 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zle03400]
    135460082 (APTX)
Enzymes [BR:zle01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     135460082 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     135460082 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     135460082 (APTX)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     135460082 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     135460082 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA
Other DBs
NCBI-GeneID: 135460082
NCBI-ProteinID: XP_064592809
LinkDB
Position
Z:59117288..59127472
AA seq 344 aa
MRVCWLVGKEKCAQRVKLPHLEAVVVGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVNIGKGEVVKMKPGQVLHIVNNLYPYTVQFAEESGKAVPETDKMSNEGSCE
NDDTELVPRKTMKLEVVDTQGSSINPKLSNTSVTTHEGTSSKKEHLGHWSQGLKSSMQDP
KMQVYKDEKIVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLALLEHMHAVGQKMIEQC
PARESLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSQDVIEVVR
SKGKVMVKDHTSELLKLPLRCHRCKQQLSTIPQLKEHLRKHWPK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgcgtgtgtgctggcttgtgggcaaagagaaatgtgctcagcgagtgaaactgccacac
ttggaagctgtggtggttgggcgtggcccagagactgggataacggataagaagtgttca
cggcagcaagttcagttaaaagcagactgtaacaaggggtatgtcacagttaaacagata
ggggtaaacccaactagtgttgatcttgtgaatattggcaagggtgaagtggtgaaaatg
aagccaggccaagttctgcatattgtaaataacctttacccctacacggtgcaatttgct
gaagagtctgggaaagctgttccagaaacagacaagatgtcaaatgaaggctcctgtgag
aatgatgatactgagcttgtgcccagaaaaacaatgaagctggaagtggtggatacacaa
ggcagttctataaatcctaagcttagcaataccagtgtaactacacatgaaggaacttcg
agcaaaaaggaacatttaggacactggagtcagggtctaaagagctccatgcaagatcca
aaaatgcaggtttacaaagatgaaaagattgtagtcatcaaggataaatatcccaaagca
cgttaccactggcttatcttaccatgggaccctatttcaagcctgaagtcagtcaccagg
gaccaccttgcacttctggaacatatgcatgccgttgggcaaaaaatgattgaacagtgc
cctgcccgagagagcctggagttccgactgggttaccatgctatccccagtatgagtcag
ctacatttgcatgtaatcagccaggattttgattctccagccctgaaaaccaaaaagcac
tggaattcttttactacagactacttcttaaactctcaagatgtgatagaggtggtaaga
agcaagggaaaagtaatggtgaaagaccatacctctgaacttctcaaactccccctcaga
tgccatcgctgtaaacaacagctatccacaatcccacagttaaaggaacatcttcggaaa
cactggccaaaatga

DBGET integrated database retrieval system