Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460089
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Entry
135460089 CDS
T09958
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
135460089 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135460089 (DMXL1)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135460089 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
135460089 (DMXL1)
RAVE complex
135460089 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
135460089
NCBI-ProteinID:
XP_064592816
LinkDB
All DBs
Position
Z:65602074..65679911
Genome browser
AA seq
3080 aa
AA seq
DB search
MNLHQVLTGAVNPGDSCFSVGSLHDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNILV
GCVDCSMQQGKIAASYGKVICIFEPFSILKQNSSHHNVLHYQWQKTAQISLEAIVHNLTW
DPTGTRLLTGSNCLQLWSNVPLENPADNDSTERAGVGLGEWRCIWQCKTASQVCLMKFSP
DGEFFATAGKDDCLVKVWYNAESWRSAVSPPGASPENQAKELDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYSNWSEAVNFTNNFKRN
TSSKEKVQSALELNLRHFRRGRRRSGAVVAHTGCALHQQDPHEAHRNIPPHANALCHYHI
AASINPATDIPLLPSITSLSLGENEEKSGPFIVHWLNNKELHFTLSMEVFLQQLKRSFEH
HSPETNTEDSNQMDGRSEEEADENSDEQKGNQEKKELGDEKAAPYSSLAPLSSAIFDHEI
EVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPDVEKAIQTNESSKSQESPVRPQSRGNANVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDA
KKLLCELSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
NNQEKEMPSEKNRLSDSGNQQNGFSEKFYLIVIEYTQTRSLLHMWHLHLKAIPVSIDEKI
GSNPSEETIQTEELYSSPDPEKIQSPFTQKYRACRANLQSTSWLTLSSKMVYSQELSMPE
GVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDAKVRFWRCRVVTEASSMPQYGTDSD
VKYVWEEWPLLIEEGLPTSSAINVPGRPTDVSCAHTNRLAVAYKQAASRNSRLSQDFVMH
VSIFECESTGGSSWILEQTLKLDELGAMLDSGVSVDSDLVADDQQDTSLSHGGSVIPNTK
HLVHLDWMSREDGSHILTVGIGSKLYMFGQVSGRRQEQNGNEIAAVSHSGSPKAATLSGF
ILLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELVSTDSCSG
SMPCLTSLMKPSQSAASGLHPPKRTLTRSMTSLAQKLSGKRSASDLSMEMEDSGLFEAAH
TLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDRRLRSLTI
SASGSTARDPKMFSKTETTDYIEIDSVPPLPLYALLAADDDSSYSCSEKSNNQHSQNKKD
MPNDSYENLFQNTVISTDDLVTFEADEDSSKVIDLSQYSPTYFGPEHAQVLSRHLLHSSL
PGLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRRHTFLTTALP
PVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGVGWWVRNIHS
LRRCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFTEDRW
RKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLHDIQLALVISRLYESEFEV
SSTYKSVLQKRVLGSVSTGKESSGNIHCDPFLRSMAYWILEDYSKALDTLIKHSVEDEGG
EGDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINLGERRLF
FTTAYAHLKAGCPMLALEVLSKMPKVVKRSKLFCKSPSLVDTSKDFSPLSPVKEFETKDQ
ASSIDWSQPVFNGLGSSSDCSSGKHSSSTFSFDWSQPSALFQDEQLQLQSDSDENEESED
SSLVMKELKPLEKTEKLHETGSSYTESFSVVDDKDILSPSEDIISAQLKFRACLKILTVE
LRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYGVEVEEAQSGVSGMPEEATLHENT
EDLADQEKTMIQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQE
SQQEQSVQIPSSPPPEQNSIPLLFACTASAKTVVANPLLHLSNLTHDILHAIISLDSPPH
PDTQNSKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTQRHSLRTAS
LEEAVTPNTSPAQWPGMTTLIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHSS
NELYRIMAHPLNNKMWSAIFGGGAHMPSRGQQQLKTKTGRHFPMPSPHQVVVFSMECVGF
SKSLASFSTHSPTKPSDDGEKQQKHYRLSSKTSAKESSQLPALPLVDQQSSSYKERFIPP
ELSIWDYFIAKPFLPSQSRVEYDSEESQESDEDDEDNDGDVFASNSHNQEHSNSNSYSWS
LMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICHAVLKTLQRWEQVLLRRLELYGGPP
QHYISVHASEAALAAGPALLRHKSLLEPTNTPFRSSSHVALSVKRLWQYLVKQEEVQETF
IRNIFTKRRCLNESLEEHNDTMKNSVVEDPIINKIETDLGYPGGKARIIHKESDIITAFA
VNKANRNCIAIASSHDIQELDVSAILATQIYTWVDDDMEIENKGADDFLVIHARDDLVNV
QGSTPYTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVRRMASHPTLPYYLTGAQDGS
VRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGYISLYQTNWKCCPLTGTS
PKPYLTWQCHNKTANDFVFISSSSLIATAGFSSDNRNICLWDTLVSPANSLVHAFICHDS
GATVLAYAPKHQLLISGGRKGFTCVIDLRLKQQQQLLQSHDSPVKAIAVDPTEEYFVTGS
AEGNIKVWSLSAFNLLHTFINEHARQSLFRNIGTGVMQIETGPANHIFSCGADGTVKMRI
LPDRFSPLKDTLKNDVKFMI
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgccgtgaatcccggggacagctgcttctccgtg
ggcagcctgcacgaccagcccttcacggcatatgcatcaggatgtgatattgtggtactg
gggactgacttcgaacgattacagataatccctggagcaaaacatggaaacattctagtg
ggatgtgtggactgttcaatgcaacaggggaagattgcagcttcttacggaaaggtgatt
tgtatctttgagccatttagcatcttgaagcagaacagcagtcatcataatgtgttacat
taccagtggcagaagactgctcaaatctcactggaagccatagtacataatctaacatgg
gatcccacaggtactcgccttctgactggttccaattgtcttcaactttggtccaatgtt
ccattggagaaccctgctgacaatgacagtactgaaagagcaggtgttggacttggagag
tggagatgtatctggcaatgcaaaactgcttctcaagtttgtttaatgaaattctcgcca
gatggggagttttttgctactgctggaaaggatgactgtcttgtgaaagtatggtacaat
gcagagagctggcggtcggccgtatcaccacctggtgccagtccagaaaaccaagcaaaa
gagcttgatttttcatttgtttatttggctcatcctcgatcagtaaatgcattttcatgg
agaaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttgttacccaatgacagtctgttgtac
gggggaggatacagcaattggagtgaagcagtgaacttcacaaataacttcaagagaaat
acttcaagtaaagaaaaagtgcagagtgcattggagttaaacctgaggcacttccgacga
ggaaggaggaggtcaggtgctgttgtagcacatactggatgtgctctgcatcagcaagat
cctcatgaagctcacaggaacattcctcctcacgcaaatgccctttgccactaccatatt
gctgccagtatcaatccagccacagatattcctctactgccttctatcacatctctaagt
cttggtgagaatgaagaaaaaagtggaccttttattgtacactggctaaacaacaaagaa
cttcattttaccttatctatggaagtgtttttgcaacaacttaaaaggagttttgaacat
cattcccctgagactaatactgaggattctaatcaaatggatggcagatcagaagaagaa
gctgatgaaaattcagatgaacagaaaggaaaccaagagaagaaggaactgggtgatgag
aaagctgctccatattcaagccttgctcctttatcctctgctatttttgatcatgaaatt
gaagttctgctttctgaatggagtaaaaatgctgacatgctcttcagtatacatcctatg
gatggctccctgctggtgtggcatgtggactggctggatgaataccaacctggcatgttt
cgccaggtgcaggtgtcatttgtctcaagaattcctgttgcatttcccacaggtgatgca
aactctctttgcagaagtatagtgatgtatgcttgtaccaaaaatgttgacttagctatt
caacaaggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcttct
ggacacagtaaatctaccaacagcttaaaactaagtatcttcacacctaatgttatgatg
atttccaaacatgcagatgggtcactgaaccagtggctagtgagttttgctgaagaatct
gctttttcaactgtgctcagtatttcacacaaatcccgatattgtggtcaccgttttcat
cttaacgacttagcttgccactcagtgttaccactgctgcttacaacctcacatcacaat
gctctaatttcaccagatgttgagaaagcaatacagacaaatgagtcttctaagtctcag
gagtcaccagtaagacctcagagtagaggcaatgcaaatgtgacatcccaggatcccaat
gctgtttacagtgaacttattctatggagagtagatcctgttgggcctttgtccttttct
ggtggagtttctgaacttgctcggatcaattctcttcatgtttcagctttttctaatgtt
gcatggctgcccacgcttatacccagctattgcctcggtgcatactgtaattctccaagt
gcctgcttcgtggctagtgacggacagcatttaagattatatcaagctgtaatagatgct
aagaaacttttgtgtgagctctccaacccagaaatttctaaatatgttggagaagttttt
aacatcataagtcagcaatctacagctcgcccgggatgtatcattgaactggatgccatc
acagagcttcatggccggaaaacacagttattccatgtttttcaagaagactttatttta
aataaccaggagaaggaaatgccttcagagaagaacaggttatcagactcaggaaaccag
cagaatggattctctgaaaaattctacttaatagtgatagaatatacacaaacccgttca
ttactacatatgtggcatttacatttgaaagcaattcctgtctcaatagatgaaaagata
ggttcgaatccatctgaagaaacaatacaaacagaagaattgtattcttcaccagatcca
gagaagatccaatcacctttcactcaaaagtatcgggcctgtagagcaaaccttcagagt
accagctggcttactctgtcttccaaaatggtgtacagtcaagagttgagtatgccagaa
ggagtcgaaataataagtgtaaagccatcagcaggacatctcagttcttcttccatatat
cctgtttgtcgtgcaccttatctgctggctacttcctgctctgatgcaaaagttcgattc
tggagatgcagggttgtcactgaagcttcttccatgccacaatatggcacagacagtgat
gttaaatatgtgtgggaagaatggccattattgattgaggagggacttcctactagtagt
gctattaatgttccaggaaggccaactgatgtcagctgtgcgcacacaaacagattagca
gtggcatacaagcaggcagcgtctagaaacagccgtctttctcaagattttgtgatgcac
gttagtatttttgaatgtgagtctacagggggttcttcttggattttagaacagacgctt
aaattagatgagctaggcgccatgttggactctggtgttagtgttgatagcgatttagtg
gcagatgaccaacaagatacttctctgtctcatggtggaagtgttatacccaacactaag
cacttggtacacttggattggatgtctagggaagatggttcacatattctgacagtggga
attggatcaaaactttatatgtttggtcaggtgtctgggaggaggcaggaacaaaatggt
aacgagattgctgcagtctcccacagtggcagtcctaaggctgcgactctttctgggttt
attttgctgcgttgtgttgacttggtttcatctgtggaggggtcacctccttttcctgtg
tccttgtcttgggtgcgtgatggcattctggtagttggaatggattgtgaaatgcatgtt
tattcccagtggcaatctccttctaagcaggaactagttagtacagattcctgcagtgga
agtatgccatgcctaactagtttaatgaaaccaagccagtcagctgcctcaggtctgcat
ccaccaaagagaactttgaccagatctatgaccagccttgcacagaaacttagtgggaaa
aggtctgcctctgatctgtctatggaaatggaagattctggtctatttgaagcagctcat
acattatctccaactttacctcagtaccatccatatcaactgttggaactcatggatctc
ggtaaagtacgcagagcaaaagccattctatcccacttggtgaagtgcattgctggagaa
gttgttgctataaatgagtctgagcctaaccatgacaggaggctcagatctctgacgatc
agtgccagtggaagcactgcaagagatcccaaaatgttcagtaaaacagagactacagac
tatatagaaatagactctgttccaccattgcctctgtatgctctgcttgctgcggatgat
gattcatcttattcctgttcagagaagtccaataatcagcatagtcaaaataaaaaggat
atgcccaatgacagttatgaaaatctcttccaaaatactgttataagtacagatgacctt
gtcacatttgaggcagatgaagacagttcaaaagtcattgatctttctcaatacagccca
acttactttggaccagaacatgctcaggttctttctcgtcacttgcttcattcaagcctt
ccaggtctgactaggatggagcaaatgtcactgatggccttggcagatacaattgctact
accagtactgacattggagaaagcagggacagaagtcagggtggagaaactctcgatgag
tgtggtttaaaatttttattggctgtccggcgtcacaccttcctaacaactgcacttcct
cctgtgcatcgagcccagctgcttcaccaaggtttatctacgagccactttgcctgggca
ttccattccgtagcagaggaggagctcctgagtatgctccctgcagtgcagaaaggcgac
ccaacctggtctgagctcagagctatgggtgtgggatggtgggttcgaaacatccacagc
ctgcggagatgcatagaaaaggtggctaaagcagctttccagagaaacaatgatccactt
gatgctgccattttttaccttgcaatgaagaagaaggctgttatctggggattgtacagg
tcccaaaaagatactaaaatgacacagttttttggaaacaacttcactgaggacagatgg
cgtaaagcagccttaaagaatgcattttctttgcttggcaaacagcggtttgaacattct
gcagcgtttttcttgctggcaggacacttaaaagacgcagtggaggtctgccttgaaaaa
ctgcatgacattcagttggctcttgtaatatcaaggctttatgaatcggagtttgaagtg
tctagtacttacaaatctgtactacagaagagagttttgggaagtgtgtctactggaaaa
gagagctcagggaacattcactgtgaccctttcttgcgaagcatggcatactggattttg
gaagattatagcaaggctcttgacactttgattaaacattctgttgaagatgaaggaggt
gaaggggatggctcatcgagttgcaatcctgcagtgtttaacttctataactacctaaga
acacaccccctcttgctgaggcgtcattttggctcttctgacacatcttccacacacatc
tgcctaacagtagaaaatggattagctgacaaaatcaacctaggtgaaagacggctattt
ttcaccactgcatatgctcatctaaaagctggttgtcctatgttggccttagaagtgtta
tcaaagatgcccaaagttgtcaagaggtcaaagttattctgtaaatcccctagtttagtg
gatactagtaaagatttctcaccattatctccagttaaagagtttgaaacaaaagatcaa
gcttccagtattgattggtcacagccagtattcaatggtctaggttcatcttcagattgc
tcatcaggaaagcattcaagttctactttttcctttgattggagccagccaagtgctctg
ttccaagatgaacaattgcagttgcagtcagacagtgatgaaaatgaggaaagtgaagat
tcttccttggtaatgaaagagctaaaacctctggagaaaactgaaaaactgcatgaaaca
ggttctagctacacagaatcttttagtgtagttgatgacaaagatattctgagtccatca
gaagatataatttcagcacagctgaagtttagggcgtgcctgaaaatccttactgtggag
cttcgtacgctatccactggctatgaagtcgatggtggaaagttgcggtatcagctttac
cagtggcttgagagagaagtggtagctcttcagaagacctgtgattatggtgttgaagta
gaagaggcacagtcaggagttagcgggatgccagaggaagctacattacatgaaaacact
gaagacttagctgaccaggaaaaaactatgatacagaaagaagactttcagaaacgacgg
caatggcttctgaagtatcagtctctcctcagaatgttccttagttactgtatacttcat
ggctcacacggtggaggcttagcatctgtcagaatggaattaattttgctcttgcaggaa
tctcagcaggagcagtcagtacagataccttccagccctccaccagagcaaaactccata
cctctcctatttgcttgcacagctagtgccaaaacagtggtggctaatccattgctacat
cttagtaatttaactcatgatatattacatgctataataagccttgattcaccacctcat
ccagatactcagaacagcaagatatatgtaatgcataccttagcagcgtcgctctctgct
tgcatctatcaatgtctctgtgatggccacagctacagctcatttcaagcaaatcagttc
actggaacggtgtaccagaccgtcctgttaactcagcgtcattctttaagaacagcaagc
ttagaagaagcagtgactcccaacacatcacctgctcagtggccaggaatgacgactcta
atacgcctcttgaattctgctggtgaggaagcccagccaggtctcacagttctactttgt
gaaattctaactgcagtctatctcagcctgttcatccatggccttgcaacacattctagc
aatgagttgtatagaattatggctcatccacttaacaacaaaatgtggtctgctatcttt
ggaggaggagctcatatgcccagcagaggacagcagcaattaaagacaaaaactggtagg
cacttcccaatgcctagcccacatcaggtagtagtgttctccatggaatgcgtggggttt
tccaaatcccttgcctccttcagtactcatagtcctaccaagccttcagatgatggagag
aaacagcaaaaacattacaggctttcatcaaaaacctctgcaaaagagagttctcagttg
cctgcattgccgttggtagaccagcaatcatcatcttacaaagaaagatttatccctcct
gagcttagcatctgggattatttcattgcaaagccatttcttccatcgcaaagtagagtg
gaatatgattcagaagagagtcaggaaagtgatgaagatgatgaagacaatgatggagat
gtgtttgcatcaaattcacataaccaagagcattctaattcaaattcttacagttggtca
ctgatgagattggcgatggttcagctggtacttcacaatttgaagattttctaccctttg
gctggacatgatctttcagagcttccggttagctccccgatatgccatgcagttttgaaa
actttacagcgctgggaacaagttcttctccgacgtcttgagctgtatgggggtccacct
cagcattatatttcagttcatgcttctgaagctgccctcgctgctggtcctgcattgctt
cgacacaaaagtttactcgagcctacaaacactcctttcagatctagcagtcatgttgcg
ctgtctgtgaagaggctctggcagtacttggtcaaacaggaagaagtccaggaaactttt
ataagaaatattttcaccaagaggcgatgcctaaatgagtccttagaggagcacaatgac
accatgaaaaattccgtggtggaggaccccatcatcaataagatagaaacagatttggga
taccctggtggcaaggcaagaataatccataaggagtcggacatcattactgcttttgca
gtcaataaggcaaatcggaactgcattgcaatagcatcaagtcatgatattcaagaattg
gatgtttctgcaattttagctacgcaaatctacacctgggttgatgatgatatggaaata
gaaaataaaggggccgatgatttccttgttatacacgctcgtgatgatctggtaaatgtt
cagggaagcactccttatactcacagtaatcctggcacacctatcaatatgccttggctt
ggtagtacacaaactggcaggggtgcatctgtgatgctcaagaaagctattaataatgtc
agaagaatggcttctcatccaacactgccatattacctgacgggtgctcaggatggaagt
gtgagaatgtttgaatggggtcatgcacagcagatcacatgttttcgatctggtggcaac
tcacgggtaactcgaatgcgattcaattaccaaggaaataagtttggaattgttgatgct
gatggatatataagtttatatcagacaaattggaaatgttgtccacttactggaacttca
cctaagccatatttgacatggcagtgtcataacaaaacagccaatgactttgttttcatc
agttcatcatcgttgatagctactgcaggattttcttctgacaatagaaatatttgtctt
tgggatactctggtttctcctgcaaacagcttggtgcatgcttttatctgtcatgatagt
ggagcaactgtgctagcatatgctccaaaacaccagctgttgatatctggaggcagaaaa
ggctttacctgtgtaattgatcttcgcctaaagcagcagcaacagttactccagagtcat
gattctccagtcaaagcaattgctgttgatcctacagaagagtattttgtcacaggatct
gctgaaggcaacataaaggtatggagtctgtctgcatttaatcttcttcacactttcatc
aatgagcatgctcgacagtctctcttcagaaacattgggacaggagtcatgcaaattgaa
acaggaccagcaaatcacatattctcctgtggtgctgatggaacagtaaagatgagaatc
ttgcctgatagatttagccctttaaaggatacgttaaaaaatgatgtgaaatttatgatc
taa
DBGET
integrated database retrieval system
