Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460215
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Entry
135460215 CDS
T09958
Symbol
HCFC1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03083
Polycomb repressive complex
zle04980
Cobalamin transport and metabolism
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135460215 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
135460215 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135460215 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135460215 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135460215 (HCFC1)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135460215 (HCFC1)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135460215 (HCFC1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
135460215 (HCFC1)
HMT complexes
COMPASS/SET1 complex
135460215 (HCFC1)
MLL-HCF complex
135460215 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
135460215 (HCFC1)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135460215 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
135460215
NCBI-ProteinID:
XP_064593021
LinkDB
All DBs
Position
Unknown
AA seq
2272 aa
AA seq
DB search
MAGLGGGGSPPRAPPGPPALQPRWKRVVGWAGPVPRPRHGHRAVAIKELIVVFGGGNEGI
VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQA
SRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYV
LELRPGSGVLAWDIPITYGVLPPPRESHTAVVYTERDGRRSRLVIYGGMSGCRLGDLWTL
DIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNT
LACLNLDSMAWEPLVLETLEDNVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKD
LWYLETERPPAPGRVQLVRANTTSLEVSWGAVPTADSYLLQLQKYELPAAPAPPPVPSVP
ANPPKSPAPAAPAPPPAPPALPQLGGVGLTLLPPPAAPPNPPGVTAAAAAAAAVGTAGTA
AGTAGTGSGGTAGGVAAVAAATAGTAGAVAAPPGATLQVLPAAGGAAAAASAAATAGRAP
GVPAVLKVTGPPAATAGPPLVTVRSAGPGKAPVTVTSLPAGVRMVVPTQSPQGTVIGSSP
QMSGMAAAPQRQRGPHEDPPASAPTVLSVPAGATIVKTVAVTPGATTLPATVKVASSPVM
VSNPATRMLKTAAAQVGTAGASPAATNAATRPIITVHKSGTVTVAQQAQVVTTVVGGVTK
TITLVKSPISVPGGSALISNLGKVMSVVQTKPVQSSAVTGQASSGPVTQIIQTKGPLPAG
TILKLVTSGEGKPTTILTSTQAGAGAAKPPTILGISSVSPSTTKPGTTTIIKTIPMSAII
TQSGATGVTSSPGIKSPITIITTKVMTSGTGTPAKIITAVPKLGGGHGQQGVTQVVLKGA
PGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGA
GGHSATASLATPITTLGTIATLSSQVLNPAAITATAAGGGLGTPTITMQPVSQPTQVTLI
TTPSGVEAQPVHDLPVSILASPTAEGPPAATSGGGGLAEPPPAEATPGTVTLVCSNPPCE
THETGTTNTATTSLVANVGTGTGGQLQLQLCEDAGGGTAVVAAPPRACSNPPCETHETGT
TNTPTAAGTARLGTPGAPPCPTQQTAATGTTMTARLCPPDGGGNGGGGGGGGSGVTSCQT
QEAAPCQTPWGQPEVGTVTAATTASCETRLCANPPCETHETGTTNTVTVTGTRLCSNPPC
ETHETGTTNTVTVTGTRLCSNPPCETHETGTTNTVTTTGTRLCSNPPCETHETGTTNTVT
TTGTRLCSNPPCETHETGTTNTVTVTGSQLCSNPLCETHETGTTNTVTTGTRLCSNPPCE
THETGTTNTVTVTGTRLCSNPPCETHETGTTNTVTMTAPRPPCSNPPCETHETGTTNTVT
TTGTRFCSNPPCETHETGTTSTATTTTATSRPPPESGTAAVPPPRGVPPCSNPPCETHET
GTTNTVTVTSSQLCSNPPCETHETGTTNTATTATAGSRPGDTTTATSAATTATTSSTGGS
PPCANPPCETPESGTTSTAATRAGSSPCQSHQGSATSTAATEGVTPSPPCATTAATSPPR
ACSNPPCETHETGTTATATTVTASMGASQEPPPPAANGQGEGETPPSEAGGPPVPPPGTP
SPGPSGGTGTPQPRAVTTVTQSTPAPGPAVPTISSLTESPPAPPETPPSTTTTTPTPPGD
PHPSQDPSSASATSPSPPGPEPAPPAQAGSEPGGSPEPLAVVVLPPSAAEGGPAEGLALP
PELLAEAGGAGGPPGLTPEELAVTAAAEAAAAAAASEEAQAQALAIQAVLQAAQQAVMGT
SEPLEPGEPGGGPSELGGALGVSEAAGGAGGALPLVLTQQDLAALVPHQQHLAEAGPPPA
APPAPPTPAPPPPAPAAPPQAAAPPPHLPTEALAPADSLNDPAGDANGLGELGTVPGGGA
PAALLPPPGDGLAPSSAFVAPPGPTVAPSPAKLQAAAALAEVANGIESTPVKPEPGAPPK
ALPKKENQWFDVGVIKGTTMMVTHYFLPPDDAPPADDDASGVPDHSQLRRQELQPGTAYK
FRVAGLNACGRGPFSELSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGRIAEY
SVYLAIQGGPGGGPEARGGGAQLAFMRVYCGPSPSCLVPASSLASAHIDHTTKPAIIFRI
AARNDKGYGPATQVRWLQESSKDGAAGKAGSKRPLASPDLKSAPKKPKAEGQ
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgggcgggggggggtccccgccgcgggcccccccgggcccccccgcgctg
cagccgcgctggaagcgggtggtgggctgggctgggcccgtgccccggccccggcacggg
caccgcgccgtggccatcaaggagctcatcgtggtctttggagggggcaacgagggcatc
gtggacgagctgcacgtctacaacacagccaccaaccagtggttcatcccggccgtgcgg
ggggacatccccccgggctgtgccgcctacggcttcgtgtgtgacggcacgcggctgctg
gtgttcgggggcatggtggagtacggcaagtacagcaacgacctctacgagctgcaggcc
tccaggtgggagtggaagcggctgaaggcgaagacccccaaaaatgggccccccccttgt
ccccggctgggccacagcttctccctggtgggcaacaaatgttacctgtttggggggctg
gccaacgacagcgaggaccccaaaaacaacatcccccggtacctgaacgacctgtacgtg
ctggagctgcgcccgggctcgggggtgctggcctgggacatccccatcacttacggggtg
ctgccccctccccgcgaatcccacacggccgtggtgtacacggagcgcgacgggcggcgc
tcgcgcctcgtcatctacgggggcatgagcggctgcaggctgggggatttgtggaccctg
gatattgagacgctgacgtggaacaagccgagcctgagcggggtcgctcccctgccccgc
agcctccactcggccaccaccatcggcaacaagatgtacgtttttggggggtgggtaccc
ctggtgatggatgacgtgaaggtggcgacgcacgagaaggagtggaagtgcaccaacacc
ctggcctgcctgaacctggactcgatggcgtgggagccgctggtgctggagaccctggag
gacaacgtgccgcgggcccgcgccgggcactgcgccgtggccatcgccacccgcctgtac
atctggagcggccgcgacggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac
ctgtggtacctggagacagagcgcccgccggcgccgggccgcgtgcagctggtgcgcgcc
aacaccacgtcgctggaggtgagctggggcgcggtgcccacggccgactcgtacctgctg
cagctgcagaagtacgagctgcccgccgcgcccgcgccgccgcccgtgccctcggtgccc
gccaacccgcccaagagccccgcgcccgccgcgcccgcgccgccgcccgcgccccccgcc
ctgccccagctggggggcgtggggctcaccctgctgcccccgcccgccgcgccccccaac
ccgcccggcgtcaccgccgccgccgctgcggccgccgccgtggggacagcggggacggcg
gcggggacagcggggacgggcagcggtggcaccgccgggggggtggcggcggtggcggcg
gccacggcggggacagcgggggcggtggcggcgccccccggagccaccctgcaggtgctg
cccgcggccgggggggcggcggcggcagcgagtgcagcagccacggcggggagggcacct
ggtgtcccagcagtgctgaaggtcaccggtccccctgcggccaccgccgggcccccgttg
gtcacggtgcgctcggccgggcccggcaaggccccggtgacggtgacatcgctgcccgcc
ggcgtcaggatggtggtgcccacccagagcccccagggcacggtgatcggcagcagcccc
cagatgagcggcatggccgctgcgccgcagcgccagcgtggccctcacgaagatcccccg
gcctcggcgcccaccgtgctcagcgtccccgccggggccaccatcgtcaagacggtggcc
gtgacccccggggccaccaccctgcccgccaccgtcaaggtggcctcgtcacctgtcatg
gtcagcaaccccgccacgcgcatgctgaagacggcggcggcccaggtgggcacggcgggg
gcgtcacccgcggccaccaacgcggccacccggcccatcatcaccgtgcacaagtcaggg
acggtgacggtggcccagcaggcccaggtggtcaccaccgtggtcggaggggtcaccaag
accatcacgctggtcaagagccccatctccgtgccggggggcagcgccctgatctccaac
ctgggcaaggtgatgtcggtggtgcagacgaaaccggtgcagagctcggctgtcaccggg
caggcgtcgagcggccccgtcacccagatcatacagaccaagggccccctgcccgcgggg
accatcctgaagctggtgacgtcgggggaggggaagcccaccaccatcctgaccagcacg
caggcgggggcgggggcggccaagccccccaccatcctgggcatcagcagcgtgtccccc
agcaccaccaagcccgggaccaccaccatcatcaaaaccatccccatgtcggccatcatc
acccagtcgggggcgaccggtgtcaccagcagccccgggatcaagtcacccatcaccatc
atcaccaccaaggtgatgacctcgggcaccggcacccccgccaagatcatcacggctgtc
cccaagctgggcgggggacacggccagcagggcgtgacacaggtggtgctgaagggagcc
ccgggccagccggggaccatcctgaggacggtgcccatgggcggggtccggctggtcacc
cccgtcaccgtctcggccgtcaagcccacggtgaccacgctggtggtcaagggcaccacc
ggtgtgaccacgctggggacggtgacagggacagtgtccaccagcctggccggaggggca
ggtggccacagtgccacggcctcgctggccacccccatcaccaccctggggacaatcgcc
accctgtccagccaggtgctgaaccctgcggccatcacggccaccgcggccgggggcggc
ctggggacaccgaccatcaccatgcagccggtgtcccagcccacgcaggtgacgctcatc
accacgcccagcggcgtcgaggcccagcccgtccacgacctgcccgtgtccattctggcg
tccccgacggccgaaggtccccccgcggccacctcggggggcggcggcctggccgagccc
cccccggccgaggccacccccggcaccgtcaccttggtttgctccaacccgccctgcgag
acgcacgagacggggacaaccaacacggccaccaccagcctggtggccaacgtgggcacg
gggacagggggacagctgcagctgcagctctgcgaggacgcgggcggggggacggcggtg
gtggcagcgccaccccgggcctgctccaaccccccctgcgagacccacgagaccgggacc
accaacacccccacggcggcggggacagcgcgcttggggacaccgggggcgccgccctgc
cccacgcagcagacggcggccacggggacgacgatgacggcgcggttgtgtccccccgat
ggcggtggcaatggtggtggtggtggtggtggtggcagcggtgtcacctcgtgccaaacg
caggaggcagccccgtgccaaacgccctggggacagcctgaggtggggacggtcactgcg
gccaccacggcgagctgtgagacacggctgtgtgccaaccccccctgcgagacccacgag
acggggacaaccaacacggtgacggtgacagggacacggctgtgctccaaccctccctgt
gagacccatgaaacggggacaaccaacacggtgacggtgacagggacacggctgtgctcc
aaccctccttgtgagacccatgaaacggggacaaccaacacggtgacaacaacggggaca
cggctgtgctccaaccctccttgtgagacccacgagacggggacaaccaacacggtgaca
acaacggggacacggctgtgctccaacccgccctgtgaaacccatgaaacggggacaacc
aacacagtgacagtgacggggtcacagctctgctccaaccccctgtgtgagacccatgaa
acggggacaaccaacacggtgacaacggggacacggctgtgctccaacccgccctgtgag
acccacgagacggggacaaccaacacggtgacggtgacagggacacggctgtgctccaac
cctccttgtgaaacccatgaaacggggacaaccaacacggtgacaatgacagcaccgagg
ccaccctgctccaacccaccctgtgaaacccacgagacggggacaaccaacacggtgaca
acaacggggacacggttctgctccaaccccccgtgcgagacccacgagacggggacaacc
agcacggccaccaccaccacggccacctcgcgccccccgcccgagtcggggacagcagcg
gtgccaccgcctcgaggtgtccccccctgctccaaccccccctgcgagacccacgagacg
gggacgaccaacacggtgacagtgacatcgtcacagctctgctccaaccctccctgtgaa
acccacgagaccgggaccaccaacacggccaccacggccaccgcgggctcccggccgggt
gacaccaccacggccaccagcgctgccaccacggccaccacctccagcacgggggggtcc
ccgccttgtgccaaccccccctgcgagacccccgagagcgggaccaccagcacggccgcc
accagagcgggctcctcgccctgccagagccaccagggcagtgccaccagcacggccgcc
accgagggggtgacaccgtccccgccctgtgccaccaccgctgccaccagccccccccgc
gcctgctccaaccccccctgcgagacccacgagacggggacaacggccacggccaccacg
gtcaccgccagcatgggcgccagccaagagccccccccgcctgctgccaacgggcagggg
gagggggagaccccgcccagcgaggccgggggtccccccgtgcccccccccgggaccccc
agccccggccccagcggcggcaccgggaccccccagccccgggcggtcaccacggtcact
cagtccacgccagcgccggggccggccgtgccgaccatctcgtcgctgaccgaatccccc
ccggcaccccccgagacccccccaagcaccaccaccaccacgcccacccctcctggagac
ccccacccatcccaggacccctcctcagcctcggccacgtcgccgtcgccccccgggccc
gagcccgcgccccctgcccaggccggctcggagcccgggggctccccggagccgctggcc
gtggtggtgctgccgccgagcgcggccgagggcggcccggccgaggggctggcgctgccc
cccgagctgctggctgaggcggggggcgcggggggaccccccgggctgacccccgaggag
ctggcggtcaccgcggcggccgaggcggcggcagcggctgcggccagcgaggaggcgcag
gcacaggcgctggccatccaggccgtgctgcaggcggcgcagcaggccgtcatgggcacc
tcggagccgctggagcccggcgagcccggggggggcccctcggagctggggggcgccctg
ggggtctcggaggcggcggggggcgcggggggggcgctgcccctggtgctgacccagcag
gacctggcggcgctggtgccgcaccagcagcacctggccgaggccgggcccccccccgcg
gccccccccgcgccccccacccccgccccgccccctcccgcccccgccgcccccccccag
gcggccgcgccccctccccatttgcccaccgaggccttggcccccgccgacagcctcaac
gaccccgcgggcgacgccaacggcctgggggagctgggcacggtgcccggggggggcgcc
cccgccgccctgctgcccccccccggcgacggcctggccccctcgagcgccttcgtggcc
cccccgggccccacggttgcccccagccccgccaagctgcaggcggccgccgccctggcc
gaggtggccaacggcatcgagagcacgcccgtgaagcccgagccgggggcgccgcccaag
gcgctgcccaagaaggagaaccagtggttcgacgtgggcgtcatcaagggcaccaccatg
atggtcacccactacttcctgccccccgacgacgcgcccccggccgatgacgatgcctcg
ggggtcccggaccactcgcagctgcggcgccaggagctgcagccgggcacggcctacaag
ttccgcgtggccgggctcaacgcctgcggccgcgggcccttctcggagctgtcggccttc
aaaacctgcctgcccggcttccccggggcgccctgcgccatcaagatcagcaagagcccc
gacggggcgcacctgacgtgggagccgccgtcggtgacgtcggggcgcattgccgagtac
tcggtgtacctggccatccagggggggcccggggggggccccgaggcgcggggggggggc
gcccagctggccttcatgcgggtctactgcgggcccagcccctcgtgcctggtgccggcc
tccagcctggccagcgcccacatcgaccacaccaccaagccggccatcatcttccgcatc
gccgcccgcaacgacaagggctacgggcccgccacccaggtgcggtggctgcaagagtcg
agcaaggacggagccgccgggaaggcgggcagcaaacggcccctggcgtcccccgacctg
aaatccgctccaaagaagcccaaggccgaagggcagtga
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integrated database retrieval system
