Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460237
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Entry
135460237 CDS
T09958
Name
(RefSeq) fibroin heavy chain-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135460237
Transcription factors [BR:
zle03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135460237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_4
HLH
PAS_9
NupH_GANP
Motif
Other DBs
NCBI-GeneID:
135460237
NCBI-ProteinID:
XP_064593040
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MLRSTKGASKARRDQINAQIRALRDLLPLPDGDRPRLSYLHVMALACIYTRKGACLRPGP
SRGAPLELLGGPELADLVASLPGFLLAVTREGKLVGVTDNVAQHLGHSMVDLVAQGDSIY
DLLDPADHPLVRHQLSLPGPPQAERLFRCRFTTSRASRRPSAGRKLVLLRGRFQEPPGTP
GTPGSAPPALFVAFCAPLDPPPWPCPDCLLLPAFQSRHARDLALLDVSDSVLAHLGYGRA
ELLGRSWYRLLHPEDLGHVARQHLRLAGAGPEARGEVVTRLQRKDGLGWTWVYTRLRPEG
PALLAHNFVISEAEAWCLRQQLAAEAPPGPPEPFGPGLDFPASDRELPLELPLRPGLGLA
VSAGGTDGHGLGHGTDPGLGSAIGHGLGHGATATADPGLGATIGHGLGHGADPGLGSGIG
HRLGHGHSTPATADPSLGPGIGHGLGHGHSTPATTDPGLGATIGHSLGAALGSGVEPSLG
PGIGHSLGHSAAATADPGLGSSIGHGLGHSAAATTDPGLGPGVGHGLAANATVTVDPGLG
TGLGHGLGASTGHGLGASTAATPGSVAPNVGHGLGSDTGLGLGVGGGLRVDIGLDVAAGA
DTDLGAELGPAGVTAGVAGVTAGVALSIGPGLAGSAIRASVGLGIGAAALPPDIGVTVGA
GAAAGLSLGASAGSALPAGAGLDNAGLGHNAGLGHNAGHGHNTGLGQNPGLDNASLGHNA
GNGQTPGHGHNASFGHNSSLGQNPGLGQNPGFGHNSGLGQNTGHGHNASFGHNSGLGTNS
GLSSGVGLVSGASLGSELDIGLGMDIDPCSDTGLGLGSIPCSDPGPGLGLGPISCSDTGP
GLGPVPCSDTGPGLGLGPVPCSDTGLVPCSEPGLAPCPGPGLGSALAFAVGAALGSGLAQ
PGLAADPDLTLGLAAPLAPPAPPGLLRLGLGVPEPPGPAGAETWTPPYTPRQAPPFPFGP
PEPPEEKLPPSPESPGGAGPGAGGPGGALLTPETSPPPVPPVPPMPAMPAVPVA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctccaccaagggcgcctccaaggcgcgccgcgaccagatcaacgcgcagatc
cgcgccctgcgcgacctcctcccgctgcccgacggcgaccggccgcgcctctcctacctg
cacgtcatggccctcgcctgcatctacacccgcaagggcgcctgcctccgcccaggcccg
agccggggcgcgcccctggagctgctcggggggcccgagctcgccgacctggtggcgtcg
ctgcccgggttcctgctggccgtgacccgcgaggggaagctggtcggggtcaccgacaac
gtggcgcagcacctggggcactccatggtggacctggtggcacaaggggacagcatctac
gacctgctggaccccgccgatcaccccctggtgcggcaccagctcagcctgcccgggccc
ccccaggcagagcgcctgttccgctgccggttcaccacgtcgcgcgcctcgcgccgcccc
agcgccggccgcaagctcgttctgctccgggggcgcttccaggagccccccgggaccccc
gggacccccggcagcgccccccccgcgctcttcgtggccttctgcgcccccctggacccc
ccgccctggccctgccccgactgcctcctgctgcccgcgttccagagccggcacgcccgc
gacctcgccctgctcgacgtgtccgacagtgtcctggcgcacctgggctacggccgggcc
gagctgctcggccgctcctggtaccgcctgctgcaccccgaggacctggggcacgtggcc
cgccagcacctgcgcctcgcgggcgcggggccagaggctcggggcgaggtggtcactcgg
ctgcagcgcaaggacggcctgggctggacgtgggtgtacacccgcctgcggccggagggg
ccggccctgctggcccacaacttcgtcatcagcgaggccgaggcctggtgcctgcgccag
cagctggcggccgaagcccccccgggacccccggagccgttcgggcccggcctcgacttc
cccgcgagtgaccgcgagctgcccctggagctgcccctgcggcccggcctggggctggcg
gtcagcgccgggggcaccgacggacacgggctcggacacggcactgaccccggcctgggc
tccgccattggacatgggctcggacacggcgctacggccacagctgaccccggacttgga
gccaccatcggacatggccttggacatggcgctgaccctggcctggggtccggcattgga
caccgactcggacatggacacagcactccggccactgctgaccccagcctggggcctggc
attggacatggcctcggacatggacactccactccggccaccactgaccccggccttggg
gccaccatcggtcacagcctcggagctgccctgggcagtggcgtggagcccagcctgggg
cctggcattggtcacagcctcggacacagcgctgcggccactgctgaccccggcctggga
tccagcattggacatgggctcggacacagcgctgcggccaccactgaccccggcctgggg
cctggcgttggacacggcctggcagccaacgccacggtcactgttgaccctggacttggg
actggccttggacacggccttggggccagcactggacacggccttggggccagcactgcg
gccaccccggggtcagtggccccaaacgtcggccatggcctgggctcggacaccggcctg
ggcctcggcgtgggaggtggcctcagagtggacatcggcctggatgtggcggctggagct
gacactgacctcggggccgaactggggccggccggagtgaccgctggcgtggccggagtg
accgctggtgttgccctgagcattgggcccggcctggccggcagcgccatcagggccagt
gtggggctgggcattggtgcggccgcgctgcccccggacatcggagtgaccgtcggggcc
ggagccgcggccggactcagcctcggagccagcgcagggtcagctctgccggccggagct
ggactggacaatgctgggctcggacacaatgctgggctcggacacaatgctggacatgga
cacaacactggcctcggacagaaccctggactggacaacgccagcctcggacacaatgct
ggaaatggacagacccctggacatggacacaatgccagctttggacacaactccagcctt
ggacagaaccctgggctcggacagaaccctggctttggacacaattctggactcggacag
aacactggacatggacacaatgccagctttggacacaactctggcctcggaaccaattct
ggactcagctccggtgtgggcctggtgtccggagcctccctgggctccgagctggacatt
ggcctgggcatggacatcgacccctgctcggacaccgggctgggcctgggctccatcccc
tgctcggaccccggccccgggctgggcctgggccccatttcctgctcggacaccggcccc
ggcctgggccccgtcccctgctcggacaccgggcctgggctgggcctgggccccgttccg
tgctcagacaccggccttgttccctgctcggagcccggccttgctccctgcccgggcccc
ggcctgggctcagcgctcgctttcgccgtgggcgccgcgctcggctccggcctggcccag
ccgggcctcgctgccgaccccgacctcacgctgggcctggccgcccccctggcgcccccc
gccccgccggggctgctccgcctggggctgggcgtgcccgagccccccggcccggccggc
gccgagacctggacgccgccgtacacgccgcgccaggcgccgccgttccccttcgggccc
cccgagccccccgaggagaagctgccgccgagccccgagagccccggcggggccgggccg
ggcgcggggggcccggggggcgcgctgctgacccccgagacgtcgccgccgccggtgccc
ccggtgcccccaatgccagcgatgcccgcggtgcccgtggcc
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