Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460261
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Entry
135460261 CDS
T09958
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
zle04030
]
135460261
G protein-coupled receptors [BR:
zle04030
]
Rhodopsin family
Vision
Opsin
135460261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
TctB
MpPF26
Motif
Other DBs
NCBI-GeneID:
135460261
NCBI-ProteinID:
XP_064593087
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MATGVFDGAVFAARRRHDDDDTTRDSIFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSLWM
IFVVIASVFTNGLVLVATAKFKKLRHPLNWILVNLAVADLGETVIASTISVVNQIFGYFI
LGHPMCVIEGYTVSACGITALWSLAIISWERWFVVCKPFGNIKFDGKLAVAGVLFSWIWS
CAWTAPPIFGWSRYWPHGLKTSCGPDVFSGSTDPGVQSYMVVLMVTCCFFPLSVIIFCYL
QVWLAIRAVAAQQKESESTQKAEKEVSRMVVVMILAYCFCWGPYTIFACFAAANPGYAFH
PLTAALPAFFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDGSEVSTSRTEVSSVSNS
SVSPA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggcgttttcgacggggcggttttcgccgcgcgccggcgtcacgacgacgac
gacaccacgcgcgacagcatcttcacctacaccaacagcaacaacacgcgcggtcccttt
gagggccccaactaccacatcgccccacgctgggtgtacaacctgacgtcgctgtggatg
atctttgtggtgatcgcctcggtgttcaccaacgggctggtgctggtggccacggccaag
ttcaagaagctgcggcaccccctgaactggatcctggtcaacctggccgtggccgacctg
ggcgagacggtcatcgccagcaccatcagcgtggtcaaccagatcttcggctacttcatc
ctgggccaccccatgtgcgtcatcgagggctacaccgtcagcgcctgcggcatcacggcg
ctctggtcgctggccatcatctcctgggagcgctggttcgtggtgtgcaaacccttcggc
aacatcaagttcgacggcaagctggcggtggccggggtcctcttctcgtggatctggtcc
tgcgcctggaccgcgccccccatcttcggctggagcaggtactggccccacgggctgaag
acctcgtgcgggccggacgtgttcagcggcagcacggacccgggcgtgcagtcctacatg
gtggtgctgatggtcacctgctgcttcttcccgctgtccgtcatcatcttctgctacctg
caagtgtggctggccatccgtgcggtggctgcccagcagaaggagtcggagtcgacgcag
aaggccgagaaggaggtgtcgcgcatggtggtggtgatgatcctggcctactgcttctgc
tgggggccctacaccatcttcgcctgcttcgccgccgccaaccccggctacgccttccac
ccgctcaccgccgccctgcccgccttcttcgccaagagcgccaccatctacaaccccatc
atctacgtcttcatgaacagacagttccggaactgcatcctgcagctctttggcaagaag
gtggacgatggctccgaggtctccacctcccgcaccgaggtgtcctcggtgtccaactcc
tccgtgtcccccgcctag
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