KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460271
Entry
135460271         CDS       T09958                                 
Symbol
POLR2G
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03020  RNA polymerase
zle03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135460271 (POLR2G)
  09124 Replication and repair
   03420 Nucleotide excision repair
    135460271 (POLR2G)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zle03021]
    135460271 (POLR2G)
   03019 Messenger RNA biogenesis [BR:zle03019]
    135460271 (POLR2G)
   03400 DNA repair and recombination proteins [BR:zle03400]
    135460271 (POLR2G)
Transcription machinery [BR:zle03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135460271 (POLR2G)
Messenger RNA biogenesis [BR:zle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135460271 (POLR2G)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135460271 (POLR2G)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 135460271
NCBI-ProteinID: XP_064593101
LinkDB
Position
Unknown
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVRYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccacatctccctggagcacgagatcctcctgcacccccggtacttcgggccc
aacctgctcaacaccgtcaaacagaaactcttcaccgaggtggaggggacctgcaccggg
aagtacggattcgttatagcagtgaccaccattgacaacattggggctggggtgatccag
cccggccgggggttcgtcctctaccccgtccgctacaaggccatcgtgttccggcccttc
aagggggaggtcgtggacgccgtggtcacccaggtcaacaaggtcgggctgttcaccgag
atcgggccgatgtcctgcttcatctcccgccactccatcccctccgagatggaattcgac
cccaactccaaccccccctgctacaaaaccgtcgatgaggacatcgtgatccagcaggac
gatgagatccggctgaagatcgtggggacccgcgtggacaagaacgacatctttgccatt
ggctccttgatggacgattacctgggcctcgtcagctga

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