Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460337
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Entry
135460337 CDS
T09958
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04120
Ubiquitin mediated proteolysis
zle04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135460337 (SYVN1)
04120 Ubiquitin mediated proteolysis
135460337 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135460337 (SYVN1)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135460337 (SYVN1)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135460337 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
135460337
NCBI-ProteinID:
XP_064593205
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LLTMVLTIFIKYVLHSIDLQNDNPWDNKAVFMLYTELFTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPQPPPEAPAPAPAAPAQPPNF
PQGLLPPFPPGMFPFWPPVGPFPPGPGPAAPAPPGTDGAAAAAGAAAGSRPGAGPGSGPG
SGPGAVPGTAGSEPGGAGAVPGLPLPPPWVGMPWPPLFGVPPMPVPPAGFAGLTEEELRA
LEGHERQHLEARLQCLHNIHTLLDAAMLQISQYLGVLAHIGTPRGAPRPPPPRESPPEEP
PGAAGGSDAAPAEDEEEAEGTEEPPEGPEPPEGPDTAELRRRRLQRLGTPPH
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacagccctggtcatggcgggcagcctggctctcaccacggccgtggttgcc
cacgcctattacctgaagcaccagttctaccctaccgtggtttacctgaccaaatccagc
cccagcatggctgtgctgtacatccaggcctttgtgctcgtgttcctgctgggcaagttc
atgggcaaggtgttcttcgggcagctgcgggcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgcgtggatttcatggagaggagccccaacatctcgtggctgttccacttccgc
atcgtctcgctgatgttcctgctgggcatcctggatttcctctttgtcagccacgcgtac
cacagcatcctgacccgcggcgcctccgtgcagctcgtcttcggcttcgagtacgccatc
ctgctgaccatggtgctgaccatcttcatcaagtacgtgctgcactccatcgacctgcag
aacgacaacccctgggacaacaaggccgtgttcatgctctacaccgagctcttcaccggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtcacc
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctgtaccccgacgccacg
gccgaggagctgcaggccatggacaacgtgtgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttc
cagcggcagcagacgtgccccacgtgccgcatggacgtgctccgggcatcgctgcccccg
cagccgcccccggaggctccggcaccggcaccggcagcgccggcacagcccccgaacttt
ccccaggggctgctgcccccgttccccccgggcatgttcccgttctggccgcccgtgggc
cccttcccgcccggccccggccccgctgccccggccccgcctggcactgacggagctgct
gcggctgctggagctgctgctggttcccgtcccggtgccggtcccggttctggtcccggt
tctggtcccggtgccgttcccggcactgcggggtcggagccgggcggggccggggcggtg
ccggggctgccgctgcccccgccatgggtggggatgccctggccgccgctcttcggggtg
ccccccatgccggtgccccccgccggcttcgcggggctgacggaggaggagctgcgggcg
ctggaggggcacgagcggcagcacctggaggcgcggctgcagtgcctgcacaacatccac
acgctgctggacgccgccatgctgcagatcagccagtacctgggcgtgctggcacacatc
gggaccccccgaggcgccccccggccgccccccccccgtgagagccccccggaggagccc
ccgggagccgccggaggcagcgatgccgcccccgctgaggatgaggaggaggccgaaggc
accgaggagcccccagagggccctgaacccccagagggccccgacacggccgagctgcgg
cggcggcgcctgcagaggctggggacccccccccactga
DBGET
integrated database retrieval system
