Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460374
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Entry
135460374 CDS
T09958
Name
(RefSeq) transcription factor RFX3-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135460374
Transcription factors [BR:
zle03000
]
Eukaryotic type
Other basic domains
RF-X
135460374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
135460374
NCBI-ProteinID:
XP_064593239
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MQTSESGSDTGSTVTLQASVAGQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
EGSDTVYRNGTIRTTYPYTETQMYSQNTGGNYFEGSSAQATTVVSSHSMVGTGGIQMGVA
GGQLISNSGGTYLIGNSMENSGHSVTHTTRASPATLQWLLDNYETAEGVSLPRSTLYNHY
LRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQED
MQYMAMRQQPMQQKQRYKPLPKVDGVPDSFTGSGQQTGTSAEQTIIAQSQHHQQFLDASR
VLPEFGEVEISSLPDGTTLEDIKSLQSLYREHCEAIVDVIVNLQFSLIEKLWQTFWRYSP
SAPADDVAIIELSNLSEIESRLPKGKLITLCKNESILKWMGNCDHVMYQALVEILIPDVL
RPIPSALTQAIRNFAKSLEGWLSSAMNNIPQRMIQSKVATVSAFAQTLRRYTSLNHLAQA
ARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQKLETDFKMTLQQQSTLEQ
WAAWLDNVMVQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRL
LYDEYMFYLVEHRVAQATGETPIAVMGEFGDLNTLSPGNMDKDEGSEVESELEEEMDENG
GPQAKREKTDLNQAFQVGCLQQPVLESGIEQSLLNPIHNEHIVTNTQTIRQCSATGNTYT
SV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcagacatcagagtctggatcagacacaggttcgactgtgactttacaagcatctgtg
gctggccaggcagcagtgcccacacaggttgtacagcaggtaccggttcagcaacaggta
cagcaagtacagactgtgcaacaggtacaacatgtctacccagcccaggttcagtatgtg
gagggaagtgacacagtctacagaaatggaacaattcgaacaacttatccttacacggaa
acccagatgtatagccaaaacactgggggaaattacttcgaaggaagttctgcacaggca
actacagtggtctcctctcatagtatggtgggcaccggagggattcagatgggtgttgca
ggaggacagctcattagcaactcaggagggacctatctgattggcaattcaatggaaaat
tctggtcattcagtgactcatacaacacgggcctccccagctacactccaatggctttta
gacaactatgaaactgcagaaggagtgagtctccccagaagtaccctttacaaccattac
ttacgtcattgtcaggagcacaagttagatccagtcaatgctgcctcctttggaaaactc
atacggtcaatcttcatgggattacggaccagaagactgggaaccagggggaactctaaa
taccattattatgggattcgtgtcaaaccagattctccccttaatcggttacaagaggac
atgcaatatatggctatgagacagcaacccatgcagcagaaacagaggtacaagcctttg
ccaaaagtggatggagttccagatagtttcacaggaagtggtcaacagacaggcacatct
gctgaacaaactataattgcccaaagtcaacatcatcaacagtttttagatgcatctcga
gtacttccagagtttggcgaagttgaaatatcttctctgccagatggtactacccttgag
gacataaaatcactgcaaagtctttatcgagaacactgtgaggcaatagtggatgttatt
gtgaatcttcagtttagcctgatagaaaaattgtggcaaactttctggcgctattctccc
tctgctccagctgacgatgtggctattattgaactgagcaatctgagtgaaatagaaagt
cgacttccaaaaggaaaacttattactctgtgcaaaaatgagtctattctgaaatggatg
ggtaactgtgaccatgtgatgtaccaggctttggtggagattctcattcctgatgtcctt
agacctattcctagtgccttgactcaggccattcgcaattttgcaaaaagccttgaaggt
tggctttccagtgccatgaacaatattccacagagaatgatacaaagcaaggttgccact
gtaagtgcctttgcccagactttgagaagatacacatctctcaatcacctggctcaggca
gctcgggctgtgcttcagaacacttctcagatcaaccagatgctcagtgatctcaaccgt
gtggattttgccaatgtacaggaacaggcttcctgggtgtgtcagtgtgatgacaatatg
gttcaaaaactagaaacagatttcaagatgactcttcagcagcagagcactctagagcag
tgggcggcctggcttgataatgtaatggtgcaagcattgaaaccatatgaaggaagaccc
agctttcctaaagcagcacgtcaatttcttttaaaatggtctttctacagctcaatggtg
attcgagatttaaccttacgcagtgctgctagctttggctcttttcatctgatccgcttg
ctttatgatgagtacatgttttacttagtcgaacatcgtgttgctcaggcaacaggagaa
acacctatcgcagttatgggagagtttggtgatttaaatactctatcccctggaaatatg
gataaagatgagggcagtgaagttgaaagtgaactagaagaagagatggatgaaaatgga
gggccacaagccaagagggagaaaacagacttaaaccaagcatttcaggtgggctgcttg
cagcagccagtgcttgagagtggaatagagcagagcctcctgaacccaattcataatgag
cacattgttacaaatactcagactatcagacaatgcagtgctactggaaatacatatact
tcagtctaa
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