Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460415
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Entry
135460415 CDS
T09958
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135460415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135460415
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
135460415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
MIF4G
Motif
Other DBs
NCBI-GeneID:
135460415
NCBI-ProteinID:
XP_064593295
LinkDB
All DBs
Position
Unknown
AA seq
2771 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTTGMRNLHENKVSSQLSGNSANYHADNS
RHGSNEDYLQMVHRISSDDGDPSVRNAASFSLRSPQSVCSPSGSDGTLKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
LQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTEQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPQEVGGATGGNRAASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDIIKKPEEIKQYNDVFVCVPQEDTVGVLKFKPENHPE
IFRKMSDFGGQKTDIQQNENRQMEFQQNVSRQLESKQNEKKQVEAKHESKHESRQMDVKL
NENRQTESKQNQSRQMEMKQNEGKQNNGKQEIRQRPETPKQKNEGRPEMPKHRHDNRRDS
SKPLSDKKIEISRHKIDVKSDPSRIKSESRPDPTKLRPDGRSVSDTPRRDHDSLKQRSED
REESERYRGDPSKIRRPENSRSSNKNEHDSKHGIKSDSSKPEKFARKHRHESGESRERFS
SGDQKSRPDSPRIKQEGRGDSNKSRPDKPGFKSQNSKDEQRTDGNKSKVNSNKAHADSKA
EFPSYLLGARSGALKHFVIPKIKRDKDVNVTQESRKTEFKGEQDKVEKIGLVEDLNKGAK
PIVVLQKLSLDDVQKFIKDREDKSRGSCFKPSKNKSSKSNKGSIDQSVLKELPPDLLAEI
ESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEE
HDRRSSGDHRRSGYCHEGRRTSGSGRYRNRSPNDSEMDDYSPLPSLSEVARKMKKKEKQK
KRKAYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTALGDDDEIPQELLLGKHQLS
ELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLFNHNNDTEDEERLWRDL
IMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRVD
PHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGI
TPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSD
TDGEPMYIQMVTALVLQLIQCVVHLPSTEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQ
NFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNK
STEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGKDEIQQLQKALLDYL
DENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHR
AETRKTFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILR
VLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFV
LCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDE
EGIKKLVNETFQKLWFTPTLHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSE
EDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKSVNSGRLVACITTLFLFSKIRPQL
MVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIK
YGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPA
LLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFA
FIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVA
KQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQC
VPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCPQNPV
RGFRHDESSNALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACFP
YQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEETESDSNSGSESK
SEEEASKPRRLRKRVNSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLLLMLKQH
LKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKITEEVKR
SIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETEDDESD
GEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSN
GFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQNLR
SLYAAKDGTSS
NT seq
8316 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttttggcttgcagggatgaaaac
ttggtttcacagctcatccacagtctcaatcaggtgtcaacagatcacatagaattgaaa
gataacctcggcagtgatgatccggagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatatggggtgcaaagc
gggatgatgatgtcgcagtttaatatttctcagaactccatgagaggtagtcctgcatct
tctaattatcaacaaactactatctcacatagcccttccagccggtttgtgccaccacaa
acaagctctggtaacaggtttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagtcctgcaggatacatgccatattcacatcctccaagttacacaccacatcct
cagatgcagcaagcttcagtatctagtcccattgtcacaactgggatgagaaatctccat
gaaaataaagtttcaagtcagttgtctggaaattcagctaattatcatgctgataattct
agacatggctcaaatgaagactatctacagatggtgcacaggataagtagtgatgatgga
gatccttcagtaaggaatgctgcatctttttccttgaggtcaccacagtcagtctgctct
ccatctggaagtgatggaacccttaaaggatcaagacaacctttaatccaacaatctcaa
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacgtta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtttcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccattaaacgctgctcagtgtttg
ctgcagcacgaacagacagctttccttcaggcacaacaagtgcctgttttgcaacagaac
acttcagttgctgcaaaacagcctcaaactcctgtggtacagacagagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctgaagaagcgaaaacaagaaaataaaccacaggaggttggaggtgctact
ggaggaaatagagcagcttctcaggagacaggttctgcaggaaatggggcaaggccagcg
ctgatggttagtattgatctgcagcaagcaggaagagcagattctcaggcaacagtaact
caagatttggacatcatcaaaaaacctgaagaaattaagcagtataatgatgtgtttgtg
tgtgttccccaagaagacactgttggagttcttaaatttaaacctgaaaaccatcctgag
atttttaggaaaatgtcagactttgggggtcaaaagacagatatccagcaaaatgaaaac
agacaaatggaatttcagcaaaatgtgagcaggcagttggaaagtaaacagaatgagaag
aaacaggtagaagctaaacatgaaagcaagcatgaaagcagacaaatggatgtgaaacta
aatgagaacagacaaacagaatcaaaacaaaaccagagcaggcaaatggagatgaaacaa
aatgagggaaaacaaaacaatggcaaacaggaaataaggcagaggcctgaaacaccgaaa
cagaagaatgaaggcaggcctgaaatgccaaaacatagacatgataacagaagggactca
agtaaaccattatcagataagaaaatagaaatatctaggcataaaatagatgtgaaatct
gatccttcaaggataaaatctgaaagtagacccgatccaacaaaactgaggcctgatggg
cgctcagtttctgatacaccaaggcgtgaccatgatagcctcaaacaaagatcagaggac
agggaggagtcagagagatacagaggagatccatccaagatcagaagacctgaaaattcg
agatcctcaaacaaaaatgaacatgattctaaacatggtattaaatctgatagttcaaaa
cctgagaaatttgcaaggaaacatagacatgagtctggtgaatcaagggaaaggttttct
tctggggatcagaaatcaagacctgacagccctcgcattaaacaagaaggtagaggagat
tctaataaatcaagacctgataaacctggctttaaatcacaaaacagcaaggatgaacaa
aggacagatggtaacaagagtaaagtaaatagtaataaagcacatgctgacagtaaagca
gagtttcccagttatttgttgggggcaagatctggtgcattgaaacattttgtcattcca
aaaatcaagcgtgataaagatgtcaatgtcactcaggaatcaaggaaaactgaatttaaa
ggtgaacaggacaaagtagagaagattgggctagttgaagatctaaataaaggagctaag
cctatagttgtccttcaaaaactttcactggatgatgtgcagaaatttattaaggataga
gaagataaatcaaggggctcttgttttaaacctagcaagaacaagtcatccaaatctaat
aaaggtagcatagatcagtcagtgttaaaggaattaccacctgatctcctggcagaaatt
gaatccaccatgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacagtt
aatgagaaaccaaaatatgctgaaatcagttctgatgaagacaatgacagtgaagaagcc
tttgaatcttctcgtaaaagacataaaaaggatagagatgaagcttgggagtatgaagaa
catgatagaagaagttctggtgaccacaggagaagtggttattgtcatgaaggaaggagg
acttctggtagtggccgttatcgtaatcgcagtcccaatgactctgagatggatgattat
tctcctcttcctagcctcagtgaggtagctagaaaaatgaagaaaaaagaaaaacaaaag
aagaggaaagcttatgaacctaaactaacacctgaagaaatgatggattcttctactttc
aaaagatttgctgcttcaatagagaatattttggaaaatttagaagacatggattttaca
gcacttggtgatgatgatgagattccacaagaactgctactgggaaagcatcagcttagt
gagttggggagtgaatctgcaaaaatcaaggcaatgggcattatggacaagctctcaaca
gataaaacagtaaaagtcttgaatattttggagaagaatattcaagatggatcaaagctt
tccacattatttaaccataacaatgacactgaagatgaggagagattatggagagatctt
attatggagagagtgacaaaatctgctgatgcttgtcttactgctatcaatattatgaca
tcaccaaatatgcctaaagctgtatatattgaagatgtaatagaaagagttattcaatat
acaaaatttcatttgcaaaacactctctatcctcagtatgatcctgtgtatagagtggat
cctcatggcggtggtgttttaagttcaaaagcaaaacgtgccaagtgttccacccacaag
caaagagttatagtgatgttatataacaaagtttgtgacattgtcagcagtttgtcagag
ttgctagagatacagcttctcactgatacaactattcttcaaatatcatctatgggaata
acacctttctttgtagaaaatgtcagtgaactacagctatgtgccatcaaattagtgact
gcagtgttctccaggtatgaaaaacatagacagctaatactagaagaaattttcacttcc
ctcgcaagactaccaaccagcaagaggagtttgagaaatttcagattaaacagcagtgac
actgatggagagcctatgtatattcagatggtaacagcactagttctgcagcttattcag
tgtgtggtgcatttgccatcaacagaaaaagattctaattcagaggaggaatcaaacaaa
aaagtggatcaagatgtgcttatgactaactcatatgaaacagccatgagaacagcacaa
aacttcctttctattttccttaagaaatgtggcagtaaacaaggggaagaagattacaga
ccactgtttgagaactttattcaagatcttctttccacagtcaataaaccagaatggcca
gctgcagagttgctacttagtttattaggaaggctattggttcaccagttcagtaacaaa
tctacagaaatggcattaagagttgcatcgcttgactatcttggaactgtagctgcaaga
ctcaggaaagatgcagtcactagcaaaatggatcaaggttctatagccagaatactcaaa
caggtttcaggaggaaaagatgaaattcaacagctgcaaaaggctttgctagattatctg
gatgagaacacagaaactgatgcatcattagtgttttctcggaagttttatatagctcag
tggtttcgggatacaactatggagacagagaaagcaattaaatctcagaaggatgaggat
tcatctgaaggaactcatcatgcaaaagatgttgagaccacggggcagatcatgcataga
gcggaaactcgcaaaacatttcttcgcagcatcattaaaactgctccatctcagttcagt
acattaaagatgaattctgatactgtggactatgaagatgcatgtttgattgttcgctac
ttggcctctatgaggccatttgcccagagctttgatatttatttgacacagattctacgt
gtacttggtgaaaatgcaattgctgttcgaacaaaagccatgaagtgtctgtctgaggtt
gttgctgtagaccccagtattctagccaggctggatatgcaacgaggagttcatgggcgg
ctaatggataactccactagtgtaagagaggcagctgtggagcttcttggccgatttgtg
ctctgtcgtcctcagctagctgagcagtattatgatatgcttattgaaagaatattggat
actggtatcagtgtcagaaaaagagtcataaagatacttagggatatctgcattgaacaa
ccaacatttcccaaaattactgagatgtgtgtaaaaatgattcggagagtcaatgatgaa
gaaggcattaagaaattagtaaatgagacattccagaagctctggttcactccaactcta
catcatgacaaagaagcaatgactaggaaaatactaaacatcactgatgtggttgcagct
tgtagagatacaggctatgattggtttgaacaacttcttcaaaatctgttgaagtcagaa
gaagatgcctcatataaacctgtgaagaaagcctgtactcaacttgttgacaatttggtt
gagcacattcttaaatatgaggaatccttgtcagattctgacaacaaaagtgtgaattct
ggtcgcttggttgcttgcataaccactttgttcttattcagcaaaatcaggccccagcta
atggtcaaacatgccatgaccatgcagccatacctgaccactaaatgtagtacccagaat
gatttcatggtgatctgcaatgttgcaaaaatcttagaacttgtagtgccactaatggaa
cacccaagtgagacatttcttgccactattgaggaagacctcatgaaactcatcatcaaa
tatggcatgacagttgttcagcattgtgtgagctgtcttggggctgttgtgaacaaggtc
actcagaactataaatttgtgtgggcctgttttaatagatactatggtgcactttcaaaa
ttaaaaagtcaacaccaagaagaccccaacagtacaatacttactgccaataaaccagca
ctccttagatcacttttcactgttggagcactgtgtcggcattttgattttgatcaggaa
gattttaagggcaacagtaaggttaacattaaggataaagtacttgaactactgatgtat
tttacaaagcattcagatgaagaagtacagacaaaagccattattggccttggatttgca
tttatacaacacccaagtttaatgtttgaacaggaagtgaagactctgtacaacagcatt
ctttcggacaagaactgttcagtaaacttaaaaatccaggtgttgaaaaaccttcagacc
tacttgcaggaggaggatacacgtatgcagcaggcagacagagactggaaaaaagtagca
aagcaggaagatctgaaagaaatgggtgatatttcctcagggatgagtagttccatcatg
cagctatatctcaaacaggtccttgaggctttctttcatacccagtccagtgtacgccac
tttgctctaaatgtcattgcactgacattaaaccagggtctcatccatcctgttcagtgt
gtgccgtacttaattgctatgggcacagatccagagccctctatgcgaaacaaagcagac
cagcaattggtggaaatagacaaaaagtatgctgggttcattcatatgaaagcagtggct
ggtatgaagatgtcttaccaggtacaacaggcaatcaatacctgcccacagaatcctgtg
agaggttttagacatgatgaatcatccaatgcattgtgttcacacctatactccatgatt
cgagggaaccgtcaacacagacgagcatttctaatttccttactcaacctctttgatgat
actgcaaaaacagaagtgaatatgctcttgtacatagcagacaatctagcctgttttcct
tatcaaacacaggaagagccactgtttataatgcatcatatagacattacactatcagtt
tctggtagcaacctactacagtcatttaaagagtctatggtgaaagacaaaaaaaaggaa
agaaagccttcatcagacgaggagactgagagtgacagtaacagtggtagtgagagcaaa
agtgaggaggaagcttctaagcctcggaggttgcggaaacgagtaaactctgattcagat
tctgatgaagaaaatgatataaatgccgtgatgaaatgtttaccagaaaattcagctcct
ttaattgaatttgcaaatgtctcccaaggcatattattacttttgatgctgaaacagcat
ttaaagaacctctgtggattctctgatagtaaaattcagaaatattctccatctgaatct
gcaaaagtgtatgataaagctataaacaggaagacaggagtacatttccatccaaaacaa
actctggattttctgcggagtgatatggctaattctaagattactgaagaagtaaagagg
agtatagtaaaacagtacttagatttcaagctccttatggaacatttggatcctgatgaa
gaggaagaagatggagaggtgtcagctagcacaaatgctcggaacaaagcaattacctca
cttcttggaggaggcagccctaaaaacaatgcagctgagacagaggatgatgaaagtgat
ggggaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagac
tctacagagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatt
tgctgtccaaagtacaaagaccgaccacaaattgcaagagtagtacagaaaaccagcaat
ggcttcagtgttcagtggatggcaggctcctacagtggctcctggactgaggctaagcgc
cgtgatggccgcaaactggtgccttgggtagacactattaaagagtcagacattatttac
aaaaaaattgctctaacgagtgctaataagctgactaataaagttgttcaaaatttacga
tcgctgtatgctgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
