KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460424
Entry
135460424         CDS       T09958                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zle04121]
    135460424
   03400 DNA repair and recombination proteins [BR:zle03400]
    135460424
Ubiquitin system [BR:zle04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    135460424
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     135460424
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 DUF1510 UBA_Rad5 CUE
Other DBs
NCBI-GeneID: 135460424
NCBI-ProteinID: XP_064593306
LinkDB
Position
Unknown
AA seq 1109 aa
MMTSVVSERTRGTRDKMQISTSHPTQPQKQVVQATAEQIRLAQMIYDKNDTDFEDKVKQL
MEVTGKNQDECIVALHDCNGDMNRAINILLEGSSDTTSWETVGGKKKNLGKEGLENKENR
EKRGDREMSRGWGSSNRWGRGGNRGREFRAEENGVDNSQGDRPSDRGKRSRGRGFGRGRG
RGAGRFSTQGMGTFNPADYMESSATDGFGTRSEVWETGQNDADDGTGAWKNSVEEWTAED
WNEDLSETKVFTASSVPAENHVTPRQSIDLVTLLQKPEKPVTLTQETKGHSFEAPQQQTF
GQALVFTNSQHSTQMASGNGSSSAVNSYSPQSLSAVLCPGFRERGSPKLTNSTGSQILDQ
LKSPSLGQFTSQQNNNSSTTTTASSWDQNPPITQASVLSQFDLKSQPQPSPVLIHLTQRQ
QQQTQTAPVPPPGLESFSQVKLHKPLPVDTSTAVSKMLQLPTISMDNQEVTAHQTQQKQL
KPPKRRIIPASKIPASAVEMPGSADVTGLNVQFGAMEFGSEPMLTEFGSTSSSENTSQAT
NNSLYTKSVNDPLNTSLPISNTVQESTYTTSAVSSSSVTCSSQSTSPVTTSSYEQTSALS
RIVYESSMAPSQPTPVAVTNGHNSVRTQATLDTTSSVPVLKTEPSPSLPSAGSLPSMVST
TASLLPSALQHAGTLPSLPQSSDLASSSLSQLSSSLSNHQSGLSSASVLSSSTSHVHTSV
ENTTSLQPSTTFSTASTSATSTTSSVVSMASSMNTTASLGLSVTSVSATTRAAPLMSSGK
APPNLPQGLSPLLHNQYIVGPGGLLPAYPQIYGYDDLQMLQPRLPMDYYGITFPAPATLT
GRDGSLANNPFSGDVTKFGRGDSASPAPATTLTQSQQNQTQTHHTTQQPFLNPTLPPGYS
YTGLPYYAGVPGVPSAFQYGPTMFVPPTSAKQHGVNLNTTLTPFQQGSGYGQHGYGAGYD
DLTQGTAAGDYSKGGYSGSSQAQNKSAGTGPGKGVSVTSSNTGVPDISGSVYNKTQTFDK
QGFHAGTPPSFSLPSALGSTGLNPAAAPGYAPAPFLHILPAHQQPHSQMLHHHLQQDGQG
GSGQRNQPSTMQQKSQATKTYGTSPYWTN
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgatgacttcggtggtcagtgaacgtacccggggtactagggacaaaatgcaaatttca
acctctcatccaacacaaccacagaaacaagtagtacaggcaacagcagaacagattcgc
cttgctcagatgatctatgataagaatgacacagattttgaagataaagtgaaacaactt
atggaagtgacggggaaaaaccaggatgagtgcatagtggcactacatgattgtaatggg
gacatgaacagagcaattaacatattgctggaaggaagttcagacacgacttcttgggag
actgtagggggaaagaagaaaaaccttggaaaagaaggtttggaaaacaaagagaacaga
gagaaacgaggggacagagaaatgagccgtggatggggaagttccaacagatggggaaga
ggaggcaaccgtggccgagagttcagagctgaagagaatggagtggacaacagtcaagga
gacaggccttcagaccgtgggaaacgtagccgtgggagagggtttggacgtggcagaggg
agaggagcagggaggttttcaacccaaggcatggggacatttaatcctgcagactatatg
gagtcttctgccactgatggctttgggacaagatcagaggtttgggagactggtcagaat
gatgcagatgatggaactggagcatggaaaaactcagtagaagaatggactgcagaagac
tggaatgaagatctttctgaaacaaaagtcttcactgcttcctctgttccagctgagaat
catgtgactcctaggcaaagcattgatttggtaacactgcttcaaaagcctgaaaagcct
gtgacccttacccaagagacaaaaggccactcgtttgaggctccccagcaacaaaccttt
ggccaagccctggttttcacaaattctcagcacagcacccagatggcatcaggaaatggc
agctccagtgctgtaaactcttattctcctcaaagtctgtctgcagttctttgtcctggc
tttcgagaacgtgggtctcctaaactgacaaactctactggatcccaaatcttggaccaa
ttgaaatccccaagtttgggtcagtttacctctcaacaaaacaataatagttctactacc
actaccgcatcatcctgggatcaaaacccgcccattacccaggcttcagtccttagtcag
tttgacttgaaatcgcagcctcaaccatccccagttctaatccatctgacccagcggcag
caacaacaaacacagacagcccctgttcctcctcctgggctggagtccttctcccaggta
aaactccacaagccattaccagtagacacctctaccgctgttagcaaaatgttacagctc
cccactatatctatggataaccaggaagtgactgcccaccaaacccagcagaagcagcta
aaaccaccaaaacggaggataattccagcatccaagattcctgcctcagcagtggagatg
cctggatcagcagatgtgacaggattaaatgttcagtttggagctatggagtttggatca
gagcctatgctcacagaatttggatcaacttcaagcagtgagaataccagccaggcaacc
aacaatagcttgtacacaaaatctgtcaatgatcctttgaatacctctctgccaatatcc
aatacagtacaggagtccacctacacaacctctgctgtcagctcttccagtgtgacctgc
tcatcccagagcaccagcccagtaacaacttcctcctatgagcagacttctgcgcttagt
aggatagtgtatgaaagttccatggctccatctcaaccaacccctgttgcagttacaaat
gggcacaacagtgttagaacacaggcaactcttgacactacttcatcagttcctgtgctt
aagacagaaccttctccctcactaccttctgctggttctctgcccagcatggtgtccact
actgcttcacttctgccttcagcattgcagcatgcaggaactttgcccagcttgcctcag
tccagtgatctggccagcagctcactctcacagttaagcagctccctttccaatcatcag
agcggcctctcctctgcctcagtgttgtcttcaagcacatcacatgtgcacactagtgtt
gagaacacaacttcacttcagccttcaacaactttttcaactgcttcaacctcagccact
agcaccacctcttcggttgtcagcatggcaagcagtatgaacactacagctagccttggc
ctgagtgttaccagtgtgtctgctaccacacgggcagctcccttaatgtcttcaggcaaa
gctcccccaaatctgcctcaaggtttatcacccttgttgcataaccagtatattgtggga
cctggaggacttctgcctgcctacccacagatttatggttatgatgatctccagatgctt
caacccaggctgccaatggattactacggaattacatttcctgctcctgcaaccttgaca
ggcagagatggaagccttgctaacaaccccttctcaggtgacgtaacaaaatttggccgt
ggggattctgcctcccctgctcctgctactacgctcactcagtcacagcagaaccagact
cagactcaccatacaactcagcagccattcctcaatccgaccctgcccccagggtacagc
tacactgggttaccttattatgctggtgtgcccggtgttccgagtgcattccaatatggg
ccaaccatgtttgtacctccaacatctgctaaacagcatggagtcaacctgaacaccacg
ttgactccttttcagcaagggagtggctatgggcagcatggctatggggcaggctatgat
gacttaacacagggaacagcagctggagattacagcaaaggaggctacagtgggtcatct
caagcacaaaacaaatctgctggcactggacctgggaaaggtgtttctgtgacctcaagt
aacacgggtgtgcctgatatcagtggctcagtctataacaagactcagacatttgacaaa
cagggattccatgctggcacaccaccttcttttagcctaccctctgctctcggatcaact
gggctgaaccctgctgctgccccaggttatgctccagccccatttctccatatcctccct
gcacatcagcagcctcattcccagatgctgcatcaccaccttcagcaagatgggcagggt
ggatctggccaacgcaatcaacccagcaccatgcagcaaaagtctcaggctaccaaaacc
tatggtacttctccatactggacaaactaa

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