Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460432
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Entry
135460432 CDS
T09958
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135460432
03036 Chromosome and associated proteins [BR:
zle03036
]
135460432
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135460432
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
135460432
SLIK complex
135460432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
135460432
NCBI-ProteinID:
XP_064593317
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MNGHSDEDVRNSSGESSQSDDDSGSASASESGSSSGSNSDGSSSQSGSSDSESGSESDTS
REKKQVQAKLPPKLDGSEFWKSSPSILAVQRSAVVKKQQQQKAASSDSGSEEDSSNSEDS
VDDSSSEAKKKKHKDEDWQMSGSESVSGTSSDSESEEDKEKSSCEDSESDYEPENKVKSR
KPPSRIEPKSGKKIAGQKKRQLDSSDNDDYDKRGSRRQATVNVSYKEAEETKTDSDDLLE
VCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKEPGEIQ
YLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQ
QELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQTCI
DEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGHDSLELRDYQLNGLNWLAHSWC
KGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMN
AVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAH
RLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK
GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKAL
SKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLL
IRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSED
FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKAS
VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELF
KEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELKPE
KNLRNWEEIIPEVQRRQIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKRSRRRRYSG
SDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAEL
VDKSEIDLRRLGELVHNGCIKALKDNSFGQERAGGRFGKVKGPTFRISGVQVNAKLVISH
EEELAPLHKSIPADPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIK
MDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRKKAR
SKKNRPTKTAKIKEEIKSDSSPPSEKSDDDEYNEDEIVSVKCPHKKIKAEENEEKPEPDI
GIKMESVEKRETREKENKRHLKREKKEDKNEFKNIKEKRESKLKESTQKEKEVKEEKANE
LKSENKEKNKKVSLLDIPVHITATSETVPISEESEELDQRTFGVCKERMRPVKAALKQLD
RPEKGLSEREQLEHTRQCLIKIGDHITECLKEYANPEQIKQWRKNLWIFVSKFTEFDARK
LHKLYKHAIKKRQESQQHSEQNISNNMNTHVIRNPGVERLKENTNHDDSSRDSSSDRHLS
QYYDHHKDKHQEDAYNKNDSRKRSYSAFSNGKDHRDWDHYKQDSRYLSDGKRRKLDDHRS
RDHRSNQEGSLKDSRPHANHRSHSDHRIHSDHRSTSEYIHHKKSSRDYRYHSDWQIDHRA
SGSGPRSPLDQRSPYGSRSPIGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgacgaagatgtaagaaacagtagtggagaatcaagtcagtcagat
gatgattctgggtcagcatcagcttctgaatctggttcaagctctggaagcaatagtgat
ggaagtagcagtcaatctggtagcagtgactctgagtctggttcagagtctgacacatct
agagagaagaaacaagttcaagctaaactcccaccaaaacttgatggatctgagttttgg
aagtccagtccaagtatacttgctgtgcagagatcagcagtggtcaagaagcaacaacaa
cagaaggcagcctcatcagacagtggttcagaagaggattcatcgaacagtgaagattct
gtagatgactcttccagtgaagccaagaagaaaaaacataaagatgaagactggcaaatg
tctgggtcagagtcagtatcaggaactagttctgattctgaatcagaggaagataaagag
aaaagcagttgtgaagacagtgaatctgactatgagccagaaaacaaagtcaaaagccgg
aaacctccaagcagaattgagccaaaaagtggcaaaaagattgcaggacagaaaaagagg
cagcttgattcgtcagacaatgatgactatgacaagagaggatctcgtcgccaggcaaca
gtcaatgttagctacaaagaagctgaagaaaccaagacagattctgatgacttgttggaa
gtttgtggagaagatgtcccacagcctgaagaagatgaatttgaaactatagagaagttt
atggatagtcgaattggccgaaaaggagccactggtgctgcaaccaccatctatgcagtt
gaggcagatggtgacccaaatactgggtttgaaaaatcaaaggagccaggagaaatacag
tatcttattaaatggaaaggctggtcacacatccataatacatgggaaactgaggaaaca
ctgaagcaacaaaatgttaaaggaatgaagaaactggacaactacaaaaaaaaggatcag
gaaacaaaacgctggctgaaaaatgcttctccagaagatgtggaatattataactgccag
caggaacttacagatgatctacataaacagtatcaaatagtggagaggataattgctcat
tcaaatcagaaatcagcagctggttatccagactactattgcaaatggcaaggtctgcct
tactcagaatgtagctgggaagacggtgctctcattgccaaaaaatttcagacatgtatt
gatgagtattttagcagaaaccaatccaagactactccatttaaagactgcaagattcta
aaacagaggccgaggtttgttgcactaaagaagcaaccatcttatattggaggacatgac
agtttagagttaagagattatcagttaaatggactgaactggcttgcccactcatggtgc
aaagggaatagttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaacaatt
tcttttctgaactacctgtttcacgaacatcaactgtatgggcctttcttgctagtcgtg
ccactttctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatgaat
gctgtggtttacttaggagatataactagcagaaatatgataagaactcatgaatggatg
catccacagaccaagcgattaaaatttaatatacttctaacaacttatgaaattttgctg
aaggataagtcattcctcggtggtctgaattgggtatttataggagttgatgaagctcat
cgtttaaaaaatgatgattcccttctgtacaagactttaatagactttaagtctaatcat
cgtcttcttattactggaacccctctgcaaaactcccttaaagagctttggtctttgctg
cacttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggcaaa
ggaagagagttcggttatgcaagtcttcacaaagaacttgaaccatttttactcagaaga
gtaaaaaaagatgtagaaaagtctttgcctgctaaggttgaacaaattttgaggatggaa
atgagtgcattgcagaagcaatattacaagtggattttaaccaggaattataaagccctg
agtaaaggttcaaaaggcagtacctcgggctttttgaacattatgatggaactcaagaag
tgctgtaaccattgctacctcattaaaccaccagatgataatgaattctataataagcag
gaagccttacagcatttaatacgtagcagtggcaaactaatccttcttgacaagctactg
attcgcctacgagaacgtggcaacagagtactgattttctctcagatggtgaggatgcta
gacatcctagcagagtatttgaagtatcgtcagtttccctttcagagacttgatggatca
ataaaaggggaattgaggaaacaagccttggatcattttaatgcagaaggctcagaggac
ttctgctttttgctgtctaccagagctggaggattaggtataaacttagcatctgctgac
actgtagttatatttgattctgattggaatccacagaatgatctgcaggcacaggctaga
gctcataggattggacagaagaaacaggttaatatttatcggctagttacaaaagcatca
gtagaagaagacattcttgaaagagccaagaaaaagatggtgttagatcacttagtaatt
cagagaatggacactacagggaaaactgtactacatacaggctctactccctccagctca
acaccttttaataaggaagagttatcagcaattttgaagttcggtgctgaggaacttttt
aaagaacctgaaggggaagaagaggagcctcaggaaatggatatagatgaaatcttgaag
agggccgaaactcgagaaaatgaaccaggtccactgactgtaggagatgagttgctttca
cagttcaaggtggctaacttttcaaatatggatgaagatgacattgagttgaaaccagaa
aaaaatttaagaaactgggaagaaatcattccagaagtccagcggcgacaaatagaagag
gaagaaagacaaaaagaacttgaagaaatatatatgctgccaaggatgagaaactgtgca
aaacagatcagctttaatggaagtgaagggaaacgcagtaggaggagaagatattctgga
tctgatagtgactcagtctcagaaagaaaacgaccaaaaaaacgtggaagaccgcgaact
attcctcgagaaaatattaaaggatttagtgatgcagagattaggcggtttataaagagt
tacaagaaatttggtggcccacttgaaaggttagatgctatagctagagatgctgagcta
gttgataaatctgagatagaccttagacgtctgggagaacttgtacataatggatgcatt
aaagctttaaaggacaattcctttggccaagaaagagcaggaggtagatttgggaaagtt
aaaggcccaacattccgaatatcaggagtgcaggtgaatgcaaagttagttatttctcat
gaagaagagttggcaccattgcacaaatccattcctgcagatccagaagaaaggaaaaga
tatgtcatcccatgccacaccaaggcagctcattttgatatagattggggtaaggaagat
gattccaatctgttaataggtatctacgaatatggctatggcagctgggaaatgataaaa
atggatcctgatctcagtttgacacaaaagattttacctgatgacccagataagaaacca
caggcaaagcagttgcagacccgtgcagattacctcattaaattactgaataaagacctt
gcaagaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaagaaagcaaga
agtaagaagaatagaccaacaaagactgcaaaaattaaagaagaaataaaaagtgactca
tcaccaccctcagaaaaatctgatgatgatgagtataatgaggatgagattgtttcagtg
aaatgtccacataaaaaaataaaagcagaagaaaatgaagaaaagcctgagccagatatt
ggtataaagatggaatctgtggaaaaaagagagacaagagaaaaagaaaataagcgacat
ttaaaaagagagaaaaaagaggataagaacgagtttaaaaatattaaagaaaagagagaa
agcaaactaaaagaatccacacagaaagaaaaagaagtaaaggaagaaaaggcaaatgaa
ctcaaatctgaaaacaaagaaaaaaataaaaaagtttcattgttggatattccagttcat
attactgcaactagtgaaacagttccaatatcagaagaatctgaagaactggatcagagg
acatttggtgtgtgcaaagaaagaatgaggcctgttaaagcagcattgaaacaattggat
agaccagagaaaggcctttctgaaagggaacagctggagcatactagacagtgcctaatc
aaaattggggaccacattactgaatgtctaaaagagtacgcaaatcctgaacaaattaaa
cagtggagaaaaaacttgtggatttttgtctctaagtttacagaatttgatgccagaaag
ctgcacaagctttataaacatgcaatcaaaaaacgccaagaatctcagcagcacagtgaa
cagaatattagcaacaacatgaatacacatgttattagaaatccaggtgttgaaagactg
aaggagaatacaaaccatgatgacagtagcagggatagttcttctgatagacatttgtca
cagtactatgatcatcataaggacaagcatcaggaagatgcttataataaaaatgactca
aggaaaaggtcctattcagccttcagcaatggaaaagaccacagagactgggatcactat
aaacaagacagcagatacttaagtgatggtaaacgtagaaagctggatgaccacaggagc
agagatcacaggtcaaaccaggaaggaagtttaaaagacagtcgacctcatgcaaatcac
cgttcccattcagaccacaggatacattcagatcaccgttccacttcagagtatatccat
cataaaaaatcttccagagattataggtaccactcagactggcaaatagaccacagagct
tctggtagtggcccaaggtcaccattagatcagaggtctccttatgggtcaagatctcct
ataggacacagatctccatttgaacactcatcagatcacaaaagtacacctgaacataca
tggagtagccggaaaacataa
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integrated database retrieval system
