Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460449
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Entry
135460449 CDS
T09958
Symbol
FARSA
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135460449 (FARSA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zle01007
]
135460449 (FARSA)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zle03016
]
135460449 (FARSA)
Enzymes [BR:
zle01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
135460449 (FARSA)
Amino acid related enzymes [BR:
zle01007
]
Aminoacyl-tRNA synthetase
Class II (U)
135460449 (FARSA)
Transfer RNA biogenesis [BR:
zle03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135460449 (FARSA)
Prokaryotic type
135460449 (FARSA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
MarR_2
HTH_11
tRNA-synt_2b
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
135460449
NCBI-ProteinID:
XP_064593352
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MAPSVAERLLERLDQAGAPGGLCSLEAAAQLGVDHQTLVGAVKSLQALGEVIEAEARTAT
RWELSAEGEEVLRDGSPEVRLFRSLPEEGLPQAEAMKLPGGSLGFSKAMANKWVRLDKGA
AGGPRVLRAVPSVQDTVQEHLGQVRAGGALPERERAELKRRKLLLEVTLKSFWIRKGSAF
STAVARPETELTPDMIATGSWRQLPFKPYNFSSLGLPPACGHLHPLLKVRSELRQIFLEM
GFTEMPTDNFVESSFWNFDALFQPQQHPARDQHDTFFLLDPAEAPQLPPGYSSKVKKVHS
QGGYGSQGYRYEWKVEEAKKNLLRTHTTSASARALFQLARQEKFSPVKYFSIDRVFRNES
LDATHLAEFHQVEGLVADRGLTLGHLMGVLRQFFSKLGISQLRFKPAYNPYTEPSMEVFS
YHEGLKKWVEVGNSGVFRPELLLPMGLPENVSVIAWGLSLERPTMIKYGINNIRELVGHR
VNLQMVYDSPMCRLDV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgagcgtggcggagcggctgctggagcggctggaccaggccggggccccgggc
gggctctgcagcctcgaggccgccgcccagctcggtgtggaccaccagacgctcgtgggc
gccgtgaaaagcctccaggcgctgggcgaggtgatcgaggcggaggcgcgcacggccacg
cgatgggagctgagcgccgagggcgaggaggtgctgcgggacggcagccccgaggtgcgg
ctgttccggagcctgcccgaggaggggctgccgcaggccgaggccatgaagctgcccggc
ggctccttgggcttcagcaaggctatggccaacaagtgggtgcgcctcgataagggagcg
gccggcgggccccgcgtgctccgcgccgtgccctcggtgcaggacacggtgcaggaacac
ctgggccaggtgagggccgggggggccctgcccgagcgggagcgcgccgagctcaagagg
aggaagctgctgctggaagtgaccctcaagtccttctggatccgcaagggcagcgccttc
agcacggccgtggcgcgcccggagaccgagctcaccccggacatgatcgccacgggctcc
tggcgccagctgcccttcaaaccctacaacttctcctcgctggggctgcccccggcctgc
gggcacctgcacccgctgctcaaggtgcgctcggagctgcgccagatcttcctggagatg
gggttcacggagatgcccacggataactttgtggagagctccttctggaacttcgacgcg
ctcttccagccgcagcagcacccggcgcgcgaccagcacgacaccttcttcctgctggac
cccgccgaagccccccagttgccccccggctactcgtccaaggtgaagaaggtgcactcg
cagggaggctacggctcacaggggtacaggtatgagtggaaggtggaggaggcaaagaag
aacctgctgaggacccacaccacgtcagccagtgcccgcgccctgttccagctggcacgg
caggagaagttcagccccgtgaaatatttctccatcgaccgcgtgttccgcaacgagagc
ctggacgcgacgcacctggctgagttccaccaggtggaggggctggtggccgaccggggg
ctcacgctgggccacctcatgggcgtcctgcggcagttcttcagcaagctggggatctcg
cagctgcgcttcaaacccgcctacaacccctacaccgagcccagcatggaggtgttcagc
taccacgaggggctgaagaagtgggtggaggtggggaactcaggggtcttccgccccgag
ctgctgctgcccatggggctccccgagaacgtctcggtcattgcctgggggctctcgctg
gagcgacccaccatgatcaaatacggcatcaacaacatccgcgagctcgtggggcaccgc
gtcaacctgcagatggtctacgatagccccatgtgccgcctggacgtatga
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