Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460484
Help
Entry
135460484 CDS
T09958
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zle01001
]
135460484 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135460484 (TRIM28)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135460484 (TRIM28)
Protein kinases [BR:
zle01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
135460484 (TRIM28)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135460484 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Collagen
WxL
Motif
Other DBs
NCBI-GeneID:
135460484
NCBI-ProteinID:
XP_064593411
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MAAPEVAAALGSGPGASGAELPEPLGLLELCGACRQRLSPQRKPRLLPCLHSVCRGCIGS
EHGDKNAFECPVCHQQCPLGDIMDNLFLQPIASSQSCTSCEDNASATSFCLECSEPLCET
CVGAHLRVRYTREHRVEPLSSPSDPSDPVDPMDPNDPIDPGDPAPALSWCRSHPRQPLSL
FCSSCESLTCGECHRREHRHHPGSATGGSTGTTRAIVSEPPLPPSRSPAHGPSPTKQAVP
APPELLLQGPPRLSPPPQVSPPPRMSPPPLEPAATPSPQRASSPENGATAGSARLPGRSP
REEKLVKKLLIKRRGPPSVWGSPPRLPKQPRVSLERLELDLELDPAQPPVFRIFPGPSAH
EFSLIVIEQGTPGTPGTPGTDGNEGTPGTEGTAGTVQPHGALLVKEEQQESPIGDTGDIG
DTKPVGLLPPALGDPGPVPGVPGGVPVGVPVGVPGGVPGVSCCRVCGQAGAVVMCDRCQR
CFHLHCHLPALHDVPSPEWTCLLCQELPPPVPEPEPDPEQGPPVKLSPQDQQRCEFVLLE
LLCHEPCRPLQRLCSSTDGAGAMDLTLMRARLQEKLSPAYRSPQEFARDGWALLRQFHRL
TEDKADVQSILELQRFLERRLSAAFGDQKFSRMLLEPEESLEGPAGT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctgaggtggcggcggcgctcgggagcggccccggggcgagcggagcggag
ctgcccgagccgctggggctgctggagctctgcggggcctgcaggcagcggctgagcccg
cagcggaaaccgaggctgctgccgtgcctgcactccgtgtgccggggctgcatcggcagc
gagcatggggacaagaacgcgttcgagtgccccgtgtgccaccagcagtgtcccctgggt
gacatcatggacaacctgttcctgcagcccatcgccagcagccagagctgcaccagctgc
gaggacaacgccagcgccaccagcttctgcctggagtgctcggagccgctgtgcgagacc
tgcgtgggggcgcacctgagggtcaggtacacccgggagcaccgggtggaacctttgagc
tctccatccgatcccagcgatcccgttgatcccatggatcccaacgatcccattgatccc
ggtgatccggccccggcgctgtcctggtgccgctcgcacccccggcagccgctgtcgctg
ttctgcagctcctgcgagagcctgacctgcggggagtgccacaggagagagcaccggcac
caccccgggagtgccaccggagggagcaccggcaccacccgtgccatcgtctcggagccg
cccctccccccctcgcggagccccgcccacggcccctcccccaccaagcaggctgtcccc
gcgcccccggagctgctcctgcagggccccccccggctgtcacctcccccccaggtgtca
cctcccccccggatgtcacctccccccctggagcccgcggccacccccagcccccagcgc
gcctccagccctgagaacggcgccaccgcaggcagcgcgaggctccccggccgttccccc
cgggaggagaagctcgttaagaagctgctcattaaacggaggggccccccctcagtgtgg
ggcagccccccccggctccccaagcagccgcgggtgagcctggagcgcctggagctggac
ctggagctggacccggcgcagccgcccgtgttccgcatcttcccggggccctcggcgcac
gagttcagcctcatcgtcatcgagcagggcacgccggggacaccggggacaccggggaca
gacgggaatgaggggacaccggggacagaagggacggcagggacggtgcagccgcacgga
gcgctgctggtcaaggaggagcagcaggagtcgcccatcggtgacaccggtgacattggg
gacaccaaacccgtggggctgctgccccctgccctgggtgacccgggccctgtccccggt
gtccccgggggtgtccccgtgggtgtccccgtgggtgtccccgggggtgtccccggtgtc
tcgtgctgccgcgtgtgcggccaggccggggccgtggtgatgtgtgaccgctgccagcgc
tgcttccacctgcactgccacctgcccgcgctgcacgacgtgcccagccccgagtggacg
tgtttgctgtgccaggagctgccccctcccgtgccggagccggagccggatcctgagcag
ggccccccggtgaagctgagcccccaggaccagcagcgctgcgagttcgtgctgctggag
ctgctgtgccacgagccctgccggcccctgcagcgcctctgcagctccaccgacggcgcg
ggcgccatggacctgacgctgatgcgggcgcggctgcaggagaagctgagcccggcgtac
cgcagcccgcaggagttcgcgcgcgacggctgggccctgctgcgccagttccaccgcctc
accgaggacaaggccgatgtgcagtccatcctggagctgcagcgtttcctcgagcgccgc
ctcagcgccgccttcggggaccagaaattctcccggatgctgctggagcccgaggagagc
ctggaggggccagcggggacctga
DBGET
integrated database retrieval system
