Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460562
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Entry
135460562 CDS
T09958
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135460562 (CAPRIN2)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
135460562 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
135460562
NCBI-ProteinID:
XP_064593523
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All DBs
Position
1A:complement(10836052..10869204)
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AA seq
1187 aa
AA seq
DB search
MVRLSQAPFHRPSSPSGRSEEGEEKRMKAAKQQVTPAGESPAPASPLQSALSTAASPSQA
YEIYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKKGEALNQDQLEAVEKYDEVVHNLEFA
KELHKTFSGLSQDLLKAQKKAQRRESLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDFK
GGVNGAIYLPSKELDYLIRFAKLTCPERNENLSVEDQMEQSSLYFWDLLEGSEKPVVGTT
YKHMKDLLSKLLDSGYFESIPTPRTAVPVKELEEEVNRKPEKTRQLSKGESAKESESIME
LMKSEIQPQEFLNRRYLPEAEYSVKKKPEEPRSWEAECARKQEPPKSWEMLVDIKEQEQK
QKPETLKPWEARVRQQELKRADSPKPWEARGKEEEQKCESAKAWESRVEEEQQKKAEAPK
AWVARVQEEQESPKPWVAKVREEQDQKKQESPKPWVTKVREEQEQKKQEPSKPWVTKVKE
EPEEKQESPKPWVTQAREQPEQKKPDPMKTWEVPVREEPEQKKQEPVKAWAAHVREEPEQ
KKQETREAWEKADRQQQVSPPQLQNPPKAWAAASMGPKEQMGPKKFDMEPKERRERKPKA
EYEIKKVPKPVHQPAAEFCSTSTLPKDPVLRREKLQDLMTQIQGTYNFMQESILDFDKAS
PSAIGSSQPPSVTPASSPVASKEQKLPSQSDFLQQPLQAAASSMVLHGSNTSLASADHAL
SGSEAEDLVTPQASTSLSQENEKYTSQPLYQTSSRISEPLIPKKIEIAQATIPLPSEPQS
PLPTSSTPMPSVPPAQSFQSPPASSSSVTITAAPFQAMQTVFKVNAPLPPRKDQEIKEDS
SYSAGYNQSFSTASTQTPPQCQLQSSHVAEQTSLSQESLSSVNYQPDGAVPVSNGSLAFY
PAQANVIPRPPQPYLNSRGSVRGSARGGRSLANSYRPPGGYKGFDAYRGSPSLTNGNYGQ
LQFPGRDYAGMPYSQRDVNYQQCYKRGGISSGPRANSRAGWSDSSQVSSPERDNETFTSG
DSGQGDSRSITPVDVPVSSQAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFD
LLLNNLGETFDIQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGA
PDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggctttcccaagcccctttccatcgtccatcatcaccttcaggccggtcggag
gaaggcgaggagaagaggatgaaggcggccaagcagcaggtgaccccggctggggagagc
ccggctcccgccagccccctgcagtccgcgctgagcacggcggcctctccctcgcaggcc
tacgagatctacatcgacaacgggctcatctgcctcaaacacaagatcaggaacatcgag
aaaaagaagctcaaactagaagactacaaagatcgtctgaagaaaggggaagccctcaat
caagaccaattggaggcagtagagaaatatgatgaagttgtgcacaacctggaatttgcc
aaggagcttcacaagactttttcagggcttagccaagatctgctgaaagcacagaagaag
gctcagaggagagagagcctactgaagctggaagcagagaagaagaagctgcgtacaata
cttcaagtccagtatgtgctacagaacttcactcaagagcatgttcagaaagatttcaaa
ggtggtgtgaatggtgcaatatacctgccttctaaagaactagactacctcataagattt
gcaaaactgacatgtccagaaagaaatgagaacttgagtgttgaggaccagatggagcaa
tcatctctctacttctgggaccttctagaaggaagtgagaaacctgtggttggaacaaca
tataaacacatgaaggacctgctgtccaagcttctagactctggctactttgaaagtatc
ccgactcctcgcaccgctgtgccagtgaaagagctggaagaagaagtaaatagaaaacct
gagaaaacaagacagctgtcaaaaggagagtctgccaaagaatcagaatccattatggag
cttatgaaatctgaaatacagccacaggagtttctcaacaggcgttatttgcctgaagca
gaatactctgtcaagaagaagccagaagagcccagatcttgggaagccgagtgtgctaga
aaacaagaacctccaaagtcctgggagatgcttgttgatattaaagagcaggagcagaag
cagaaaccagagaccttaaagccttgggaagctcgtgttagacagcaagaactcaagaga
gcagattctccaaagccttgggaagctcgtggtaaagaggaggagcagaagtgtgagtct
gcaaaggcctgggagagccgtgtggaggaggaacagcagaagaaggcagaagctccaaag
gcatgggtagcacgtgtccaagaggagcaggagtctcccaaaccttgggtagcaaaggtc
agggaagagcaggaccagaagaaacaggaatcacctaagccatgggtaacaaaagttagg
gaagagcaggaacagaaaaagcaggagccctcaaaaccttgggtaaccaaagttaaggaa
gaaccagaagaaaagcaggaatctccaaaaccttgggtaacccaagctagggagcaacca
gaacaaaagaagccagaccctatgaaaacatgggaagtgcctgttagggaagagccagag
caaaagaagcaggagcctgtgaaggcttgggctgcacatgttagggaggagccagaacaa
aagaagcaggagactcgagaggcttgggagaaagctgacaggcagcagcaagtgtcacct
ccacagttacagaaccctccgaaggcctgggcagctgccagtatggggccaaaggaacag
atgggcccaaagaagtttgatatggaacccaaagaaagacgggagcgcaaaccgaaggct
gaatatgagattaaaaaagtgcctaaacctgtacatcagccagctgcagaattttgctct
acttcaactcttccaaaagatccagtattgagaagggaaaagcttcaggatctgatgact
cagatacaagggacttacaacttcatgcaagagtccattctggattttgataaagcttca
ccaagtgccattggttcatcccaacctccttcagttactccagcaagtagtcctgtagct
tcaaaagagcagaaactgccaagtcagagtgattttcttcaacagccccttcaagctgct
gcttcatcaatggtgctgcatggttcaaacacttccctagcatctgctgatcatgctctt
tctggctctgaagctgaggacttggtgacaccccaggcatcaacatcactttctcaagag
aatgagaaatatacttcccagcctctgtatcagacaagttcacgtatttctgagccactg
atacctaaaaagattgaaattgcccaggcaactattcccctcccaagtgagccacagtca
ccattgcctacttcaagcacccccatgccctcagtgccaccagcacaaagctttcagtct
cctccagcaagcagcagctctgtcacaatcacagcagctccctttcaggctatgcagact
gtgtttaaagtgaatgcaccactgcctccacgtaaagaccaagaaattaaagaggattct
tcatattcagcgggatataaccagagtttctccacagcaagtacacagactcctcctcaa
tgccagctgcagtcttctcatgttgcagaacaaacctctctttcacaagaatctctgtct
tcagtgaactatcagcctgatggagctgttcctgttagcaatggtagccttgccttttat
ccagcacaggctaatgttattcccagaccccctcagccttacctcaacagtcgtgggtct
gtcagagggtctgccagaggtggaaggtcgctggctaattcctatcgcccccctggtggc
tacaaaggttttgatgcttacagaggttcaccttcattaaccaatggcaactatggccag
ctacagtttcctggtagagattatgctggaatgccatattctcagagggatgtcaattac
cagcagtgctataaacgaggtgggataagcagtggtcctcgagcaaattcaagagcaggg
tggagtgactcctctcaggtgagcagcccagagcgagacaatgagacctttaccagcggg
gactcggggcagggcgactcgcgcagcatcacccccgtggacgtgccggtgagcagccag
gccgccaccatcctgcccgtgcacgtgtacccgctgccgcagcagatgagggtcgccttc
tccgccgcccggacatccaacctggcccctggcactctggaccagcccatcgtgttcgac
ctgctgctcaataacctcggagaaacttttgatatccagctcgggaggttcaactgtcca
gtgaatggtacctacgtcttcatcttccacatgctgaaactggctgtcaatgtccctctg
tatgtgaatctcatgaagaatgaggaggtccttgtgtcggcctatgccaacgatggggct
cctgaccatgagacagccagtaaccatgcagtgctgcagctcttccagggagatcagatc
tggctacggctgcaccggggagccatctatggaagtagctggaaatactccaccttttcg
ggatacctcctttatcaggactaa
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