Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460563
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Entry
135460563 CDS
T09958
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135460563 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135460563 (THOC6)
03041 Spliceosome [BR:
zle03041
]
135460563 (THOC6)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135460563 (THOC6)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135460563 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR55
Beta-prop_SCAP
NBCH_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WDR54
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR11_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135460563
NCBI-ProteinID:
XP_064593520
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MSSAGGVRRARQLLHVSVLAQSAAPCGRFLAAANDFGEIAIFGLSAALSAEAKEENRRPV
NVFKAHSGPVYSLASTERLLLSGSDGEIRGWGWAELGRKGCRELWTRRPPCRSSLEVPEI
NGLEVNQRDHWVALAGGDGAVRVLDLESGAFTHELRGHQDLVHVVALREQLPQVLSGGED
GTVRLWDLRTGSQVQLIEVHKYQECSRPQLGKWIRCLATESDWMVCGGGPALTLWHLRSG
TPTTVFPLPHPQHHALFHQDMVLSGGVGPALHLLQLSGDVRGRVPVSPPALRSLCLHPRS
PEHQVLTVAGNSPKIDVFTNLGYRAFSLSFT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcgggcggcgtgcggcgggcccggcagctcctgcacgtgtcggtgctggcg
cagagcgcggccccgtgcgggcgcttcctggcggccgccaacgacttcggcgagatcgcg
atattcgggctctcggccgctttgagcgcggaggccaaggaggaaaaccggagaccggtg
aacgtgttcaaggcccactcgggccccgtttattccttggcctccaccgagcggctcctc
ctgagcggcagcgacggcgaaatccggggctggggctgggccgagctgggccgcaagggc
tgccgggagctttggacgcggcgcccgccctgcaggagcagcctggaggtgccggagatc
aacgggctggaggtgaaccagagggaccactgggtggcgctggcgggcggggacggcgcc
gtgcgcgtgctggacctggagagcggcgccttcacccacgagctgcgggggcaccaggac
ctggtgcacgtggtggcgctgagggagcagctcccgcaggtgctctcggggggcgaggac
ggcaccgtgcgcctctgggatctgcgcacgggctcccaggtgcagctgatcgaggtgcac
aaataccaggagtgcagccgcccccagctgggcaagtggatccggtgcctggcgaccgag
agcgactggatggtgtgcgggggcggccccgccctcaccttgtggcacctgcgctcgggg
accccgaccacggtgttccccctgccccacccccagcaccacgccctcttccaccaggac
atggtgctgtcggggggcgtcggccccgcccttcacctgctgcagctgagcggggacgtg
cgggggagggtcccggtgtcgccccccgccctccgcagcctctgcctgcacccccgctca
cctgagcaccaggtgctgacggtggccgggaacagccccaagatcgacgtcttcaccaac
ctgggctaccgggcgttctcactgagcttcacctga
DBGET
integrated database retrieval system
