Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460613
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Entry
135460613 CDS
T09958
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03022
Basal transcription factors
zle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135460613 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
135460613 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135460613 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135460613 (GTF2H4)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135460613 (GTF2H4)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135460613 (GTF2H4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
135460613
NCBI-ProteinID:
XP_064593582
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MSRVQLQCKNLQEFLRGLSPPTLDRLYGHPATCLAVFRELPGLAQAGIMRMLFLEQPLPQ
AAVGLWVKKEHSREQQQSQEVLLELRLWHPHTLPGGLPGVALHPNFRQNLRVALLGGGKA
WSDDTAPLGPDRHARDVPALDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLVQAGLMKSE
GGEPPCITSAGFQFLLLDTPAQLWFFILQYLRGAEARGMDLVEILSFLFQLSFSTLGKDY
SVEGMSESLLTFLQHLREFGLVFQRKRKSRRFYPTRLAIALASGTAGTALGTSLGTSLGT
EPDGHGFILVETNYRIYAYTDSELQVALIALFSELLYRFPNLVVAQVTRDSVQAAIANGI
TADQIIHFLRTRAHPVMAKQSPVLPPTVTDQIRLWELERDRLRFSEGVLYNQFLSQVDFE
VLRDHARALGVLVFENPARRLMVVTPAGHPDVKRFWKRQKHNG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggtgcagctgcagtgcaagaacctgcaggagttcctgcgcgggctcagcccc
cccaccctggaccggctctatgggcacccggccacctgcctggccgtcttcagggagctg
ccggggctggcgcaggccgggatcatgcggatgctgttcctggagcagccgctgccccag
gcggccgtggggctctgggtcaagaaggagcacagcagggagcagcagcagagccaggag
gtgctgctggagctgcgcctgtggcacccccacaccctcccgggggggctcccgggggtc
gccctgcaccccaacttccgccagaacctgagggtggccctgctcggggggggcaaggcc
tggtcggacgacacggccccgctgggcccggaccggcacgcccgcgacgttcccgccctg
gacaaatacgccgaggagcgctgggaggtggttttgcacttcatggttggctccccgagc
gcggccgtcagccaggacctggcgcagctgctggtgcaggccgggctcatgaagagcgag
gggggggagccgccctgcatcacctcggccgggttccagttcctgctgctcgacaccccc
gcccagctctggttcttcatcctgcagtacctcaggggggccgaggcgcgggggatggac
ctggtggagatcctgtccttcctgttccagctgagcttctccaccctgggaaaggattac
tcggtggagggcatgagcgagtcgctgctgacgttcctgcagcacctgagagagttcggg
ctggtgttccagaggaagcggaagtcgcgtcggttctacccgacccgcctggccatcgcg
ctggcctcggggacagcggggacagcgctggggacatccttggggacatccttggggaca
gagcccgacgggcacggcttcatcctggtggagaccaactaccgcatctacgcctacaca
gactcggagctgcaggtggcgctcatcgcgctcttctcggagctcctctatcgcttcccc
aacctggtggtggcacaggtgacaagggacagcgtgcaggcggccatcgccaacggcatc
accgccgaccagatcattcacttcctgcgcacccgcgcccaccccgtgatggccaaacag
agcccggtgctgcccccgaccgtcacggaccagatccggctctgggagctcgagcgggac
cggctgcgcttctccgagggtgtgctgtacaaccagttcctgtcccaggtggatttcgag
gtgctgcgggaccacgcccgcgccctgggcgtgctcgtgttcgagaacccggcccggcgc
ctgatggtcgtcacccccgcggggcaccccgacgtcaaacgcttctggaagcgccagaaa
cacaacggctga
DBGET
integrated database retrieval system
