Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460670
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Entry
135460670 CDS
T09958
Symbol
APEX1
Name
(RefSeq) DNA repair nuclease/redox regulator APEX1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135460670 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135460670 (APEX1)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
135460670 (APEX1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
135460670 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
135460670
NCBI-ProteinID:
XP_064593645
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MPKRGKKKEENGSEDEAGPAPAKAPKASPAPLYEDPPTREATPEGRRWTLKVTSWNVDGL
RAWLKKGGAKWVQEEAPDVLCLQETKCAESAVPAELRELPGLPHQFWSSAKDRPGYSGVG
LLAKTEPLDVTYGIGDPEHDVDGRVVTAEFPSLFVVCAYVPNAGRGLVRLEPRLRFDAAF
LRFLRGLDARKPVLLCGDLNVAHREIDLCHPRANRASAGFTPQERDGFTRLLESGFVDSF
RHLYPEAKGAFTFWTYLGAARARNVGWRLDYAVVSQRLAGALCDCKIRNTVQGSDHCPIT
ALLAV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgggaagaagaaggaggagaacgggagcgaggacgaggccggccccgcc
cctgccaaggcccccaaggcctccccggccccgctgtacgaggacccgcccacccgcgag
gccacgcccgaggggcggcgctggacgctcaaggtgacgtcatggaacgtggacgggctg
agggcgtggcttaaaaaaggcggggccaagtgggttcaagaggaggccccggacgtgctg
tgtctgcaggagaccaagtgcgcggagtcggcggtgccggccgagctgcgggagctgccg
gggctgccgcaccagttctggagcagcgccaaggaccggccgggctacagcggcgtgggg
ctgctggccaagaccgagcccctcgacgtcacctacggcatcggtgaccccgagcacgac
gtggacggccgggtggtgacggccgagttcccctcgctgttcgtggtctgcgcctacgtg
cccaacgccgggcgcggcctggtgcgcctggagccgcggctgcgcttcgacgccgccttc
ctgcgcttcctgcgcggcctggacgcgcgcaagcccgtgctgctctgcggcgacctcaac
gtggcgcaccgcgagatcgacctgtgccacccgcgcgccaaccgcgccagcgccggcttc
acgccgcaggagagggacggcttcaccaggctcctcgagagcggcttcgtggactccttc
cggcacctgtaccccgaggccaagggcgccttcaccttctggacgtacctgggcgcggcg
cgggcgcgcaacgtgggctggcggctggactacgccgtggtgtcgcagcgcctggcgggg
gcgctgtgcgactgcaagatccgcaacacggtgcagggcagcgaccactgccccatcacc
gccctgctggccgtctag
DBGET
integrated database retrieval system
