Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460672
Help
Entry
135460672 CDS
T09958
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135460672 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135460672 (CHD8)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135460672 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
DUF2683
Motif
Other DBs
NCBI-GeneID:
135460672
NCBI-ProteinID:
XP_064593647
LinkDB
All DBs
Position
Unknown
AA seq
2252 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDPLPPEELVAPPPAPPPPSSAAPPPADPLAEALGLSGALDPPP
NLPQNPPDLPQNLPQNPAQPEPEVLSQGNPFMGVSAPPPAAPPTQAPPKIVILKAPPPAG
AGGGPAPAATPNGGKVTLAKVLAPPTVRAGGVAAAGGGVASSAAGGVASAAGGGARQVKQ
LLLQPLKAATSAGGGVTAGATPLKHLGSLGPAQGESKRITLVLQQTPGATPGQRHVVLGT
LPGKLLLQGGAAATPGATPKAAPGAGPAKVVTIQLQVQPPAAAGQPGAGQKLQLLQPGAG
PVGVAQVPQVVGGAGQRLTVPLKVVLQPQAGSSSSPTSAGLSVVKVLSGSEMTTLTATPT
PSPRVAGGGASDESRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPD
DESDRKRRRKERPAAKEERPRRGKGQGRSKARAKASTITPVVSKKRKRNASSDNSDSEAL
PAPSPRQDDDGGGGGGGGVQKRRSNRQVKRKKYTEDLDIKLTDDEELDEELDVTGPAAPR
PESADPERPPALTPLTADGEGADAALPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSG
QSVEAEEFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKRFKTKMNQMRHFFHEDEEPFN
PDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELQEDVDEAKVAEFKRIQA
RHPELKRQPRPQAGAWKKLEASHEYKNHNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVHGAGVRGPYLVIAPLSTIANWEREFGTWTHLNTIVYHGSLASRQMIQ
QYEMYCKDAKGRLIPGAYKFDALITTFEMILSDCPELREVQWRCVVIDEAHRLKNRHCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAEFLKDFGDLKTEEQVQK
LQALLKPMMLRRLKEDVEKNLAPKQETIIEVELTNAQKRLYRAILERNFAYLARGAGHGN
VPNLLNTMMELRKCCNHPYLINGAEEQIVAELRSSLPALPGPELALQALVRSAGKLVLLD
KLLPRLRAGGHKVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPD
SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT
RNSYEREMFDKASLKLGLDKAVLQSMSGRDGSIAGIQQFSKKEIEDLLRKGAYAAIMDED
DEGAKFCEEDIEQILLRRSTTITIESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAK
KADLDLELLNSKNTLVIDTPRVRKQTRHFSTLRDDDLVEFSDLDSDDDLERPDRAGAAPR
TRRGGHHHGHHHGHSGQHGQHAAPAAPASPATPFGRSDCVRVEKHLMVYGWGRWRELAAQ
GRFKRRLSERDVESLGRAIVLFCLRHFRGDDGTRAFVCALLSPGHNNGRARTMAGQHGSL
PRGRKGRKAPKVPEGSAGAEWLLQDEGYRKHLRHHCGKLLLRVRALHFLRHEVIGDQAER
VLAGASASDIHIWFPQLEQPEPPSAWWDPEADKSLLLGVFKHGYERYHTMRADPALCFLA
RAGGPDAAAVAAEQRLEGPEGAELDKDPEDPEYKPLPGGEESDPLAGLDEEISVVDGDEG
SASSSSSSSSSSSWPSAPALTARFRRLLGALQGREPPPDPQTQNSNSERGNNSERGNNGG
NNGPGGNNGPERGNNTERRRQRRGHDPARRDKLQRWTRREQADFLRVASTFGVELEAGSG
RFRWARFRALAGLGRRSDEELTRFYHGFVAMCRQVCRLPPAPGDVPPPLSPPPLAVSPSL
ALRCLRRLALLRCLRERVLPHPALGALLARLPPPGPGSLLPPWWRPGVHDAALLRAAAQH
GLRGALLRGGIAAGRDIMDKRDKGGGTRRTERRNQDGGDSEEEEEEEEEGPEPLGAEDEE
EEDEEEEEEGEGEDEDSPPPSGEGGAPSAPLPQATPTAGAGPQNLLYWPKERALIRRLDL
ICRAVLAAGEGPPPPQDLGGLPEPAPPPAPPGPAPPAMAPPRGRHPDKEFTVQIKDEEGL
KLTFQKHRLGPNGAQRAPNPPKKNSKKLVELELRCLEGLRDPPGDPEGAMGAPPPHRGDN
PEFGDPRLHPFVEQRREKWHRKKFIPSPPSGLDLSKMVALMGGGASGTGGVASPSLAPPP
RFRPEAEEEAEAGSGCCPLLADPMLPPTSDSD
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccatcatggacctctttgacgaccccaacctgttcggcctcgaccccctc
ccccccgaggagctcgtggccccgcccccggccccgccccctccctcctcggcggccccg
ccccctgccgacccattggccgaggccttggggctctcgggggcgctggacccgccccca
aatctgccccaaaaccccccggatttgccccaaaatctgccccaaaaccccgcccagccc
gagccggaagtgctgagtcagggcaatcccttcatgggcgtgtccgccccgccccccgcg
gccccgcccacccaggccccgcccaaaatcgtcatcctcaaagccccgccccccgccggg
gcagggggaggccccgcccccgcggccacgcccaatggcgggaaagtcaccttggccaag
gtgttggccccgcccaccgtgcgggcggggggcgtggctgcggcaggagggggcgtggct
tcgtcagcagcaggaggcgtggcctcggcggcagggggcggggccaggcaggtgaagcag
ctgctgctgcagcccctgaaggcggcgacgtcagcggggggcggagtcacggctggggcc
acgcccctgaaacacctggggagcctggggcccgcacagggcgagtccaagcgcatcacc
ctggtgctccagcagacccccggtgccacgcccggccagcgccacgtcgtcctgggcacc
ctgcccggcaagctcctcctccagggcggggccgcggccacgcccggcgccacgcccaag
gccgcgcccggcgccggcccggccaaggtggtgaccatccagctgcaggtgcagcctccg
gccgcggccggacagcccggcgccggacagaagctgcagctgctgcagccgggggcgggg
ccggtgggcgtggcccaggtgccgcaggtggtgggcggggccgggcagaggctgacggtg
ccgctcaaggtggtgctgcagccgcaggccggctcctcctccagccccacctccgccggc
ctctcggtggtcaaggtgctgagcggctccgagatgaccacactgaccgctacccccacg
ccgtccccccgcgtggccggaggcggcgcctcggacgagagccgtcggctggagcaccag
aagaagcaggagaaggcgaaccggatcgtggccgaggccatcgcgcgcgcccgcgcccgc
ggcgagcagaacatcccgcgcgtgctcaacgaggacgagctgcccagcgtccggccggac
gacgagagtgaccgcaagcgccggcgcaaggagcggccggccgccaaggaggagcggccg
cggaggggcaaggggcagggccgcagcaaggccagggccaaggccagcaccatcacgccg
gtggtcagcaagaagcgcaagcgcaacgccagctcggacaattcggactcggaggcgctg
ccggcgccgtccccgcgccaggacgacgacggcgggggcggcggagggggcggagtccag
aagcgccgctcgaaccggcaggtgaagaggaagaagtacaccgaggacctggacatcaag
ctgacggacgacgaggagctggacgaggagctggacgtgaccgggccggcggcgccgcgg
ccggagagcgctgaccccgagcggccgccggcgctgaccccgctgaccgcggacggggag
ggcgcggacgcggcgctgccctccatgcagttcttcgtggagaacccgagcgaggaggac
gcggccatcgtggacaaggtgctgtccatgcgcgtggtcaagaaggagctgccctcgggt
cagtcggtggaggccgaggagttcttcgtcaagtacaagaactactcgtacctgcactgt
gagtgggcgacgatcgcgcagctggagaaggacaaacggatccaccagaaactgaaacgc
ttcaagaccaaaatgaaccaaatgcggcatttcttccacgaggacgaggagccgttcaac
cccgactacgtggaggtcgatcggatcctggacgagtcccacagcgtggacaaggacaac
ggcgagcccgtggtgtattacctggtgaaatggtgctcgttgccgtacgaggacagcacc
tgggagctgcaggaggacgtggacgaggccaaggtggccgagttcaagcggatccaggcg
cggcaccccgagctcaagagacagccccgcccccaggccggcgcctggaagaagctcgag
gcctcgcacgagtacaagaaccacaaccaactgcgggagtaccagctggagggcgtcaac
tggctgctcttcaactggtacaacaggcagaactgcatcctggcggacgagatggggctg
ggcaagacgatccagtcgatcgcgttcctgcaggaggtgcacggcgcaggtgtgcgcggg
ccctacctggtgatcgcgccgctctccaccatcgccaactgggagcgcgagttcggcacc
tggacgcacctgaacaccatcgtgtaccacggcagcctggccagccggcagatgatccag
cagtacgagatgtactgcaaggacgccaagggccgtctgatcccaggtgcgtacaagttc
gacgcgctcatcaccacgttcgagatgattctctccgactgccccgagctgcgcgaggtc
cagtggcgctgcgtggtcatcgacgaggcgcaccggctcaagaaccggcactgcaagctg
ctggacagcctgaagcacatggacctggagcacaaggtgctgctcacgggcacacctttg
cagaacacggtcgaggagctcttcagcctcctgcacttcctggagccgtcgcagttcccg
tccgaggccgagttcctcaaggacttcggggacctcaaaaccgaggagcaggtgcagaag
ctgcaggcgctgctgaagcccatgatgctgcggcgcctcaaggaggacgtggagaagaac
ctggcgcccaagcaggagaccatcatcgaggtggagctgaccaacgcgcagaagcgcctg
taccgcgccatcctggagaggaacttcgcctacctggccaggggggcggggcacggcaac
gtgcccaacctgctcaacaccatgatggagctgcgcaagtgctgcaaccacccctacctc
atcaacggtgcggaggagcagatcgtggccgagctgaggtcctccctgcccgcgctgccc
ggccccgagctggccctgcaggccctggtgcgctcggccggcaagctggtgctgctggac
aagctgctgccgcggctgcgcgccggcggccacaaggtgctggtcttctcgcagatggtg
cgctgcctggacatcctggaggactacctcatccagaaacggtacccgtacgagcgcatc
gacgggcgcgtgcggggcaacctgcgccaggccgccatcgaccgcttcagccggccggac
tcggaccggttcgtgttcctgctgtgcacgcgggcgggcgggctgggcatcaacctgacg
gcggccgacacctgcatcatcttcgactcggactggaacccccagaacgacctccaggcg
caggcgcggtgccaccgcatcgggcagagcaaggcggtcaaggtttaccggctgatcacc
aggaactcgtacgagcgcgagatgttcgacaaggccagcctgaagctgggcctggacaag
gccgtgctgcagtccatgagcggccgcgacggctccatcgctgggatccagcagttctcc
aagaaggagatcgaggacctgctgcgcaagggcgcctacgccgccatcatggacgaggac
gacgagggcgccaagttctgcgaggaggacatcgagcagatcctgctgcggcgcagcacc
accatcaccatcgagagcgagggcaagggctccaccttcgccaaggccagcttcgtggcg
tccgagaaccgcacggacatcgcgctggacgaccccaacttctggcagaaatgggccaag
aaagccgacctggacctggagctgctcaacagcaagaacacgctggtcatcgacacgccg
cgtgtccggaagcagactcgccacttcagcacgctgcgggacgatgacctggtggagttc
tcggacctggacagcgacgatgacctcgagcggccggacagggccggggccgcgccccgg
acgcggcgtggcggccaccaccacggtcaccaccatggtcatagcggtcagcacggtcag
cacgcggctccggccgctccggccagcccagcaacgccgttcgggaggagcgactgcgtg
cgggtggagaagcacctgatggtctacgggtggggccgctggcgcgagctggccgcccag
ggccgcttcaagcgccggctctcggagcgggacgtggagagcctgggccgggccatcgtc
ctgttctgcctgcggcacttccgcggcgacgacggcacccgggcgttcgtgtgtgcgtta
ttgagccctggacacaataatggacgggccaggaccatggccggacagcacgggtcgctg
ccgcggggccggaagggccggaaggcgccgaaggttccggaaggttccgcgggggccgag
tggctgctgcaggacgagggctaccggaaacacctgcggcaccactgcggcaagctgctg
ctccgtgtgcgcgccctgcacttcctgcggcacgaggtgatcggggaccaggccgagcgc
gtcctggccggggccagcgccagcgacatccacatctggttcccgcagctggagcagccg
gagccgccctcggcctggtgggaccccgaggccgacaaatccctcctgctgggggtcttc
aagcacggttacgagcggtaccacaccatgcgggcagaccccgccctgtgtttcctggcc
cgggccgggggtcccgacgccgccgccgtcgcggccgagcagcgcctggaggggcccgag
ggggccgagttggacaaagaccccgaggaccccgagtacaaacccctgccgggaggggag
gagagcgaccccctggccgggctggacgaggagatctcggtggtggacggcgacgaaggc
tcagcatcttcatcctcctcctcctcctcctcctcctcgtggccctcagcccccgctctg
accgcgcggttccgccgcctgctgggggcgctgcagggccgggagccgcccccggacccc
cagacccaaaacagcaacagcgagaggggcaacaacagcgagaggggcaataacgggggc
aacaacggccccgggggcaacaacggccccgagaggggcaacaacaccgagaggaggcgg
cagcggcgcggccacgaccccgcgcgcagggacaaactgcagcgctggaccagacgggag
caggccgatttcctgcgcgtggcctccacgttcggggtggagctggaggcgggctcgggg
cggttccgctgggcgcggttccgggcgctggccgggctcgggcgccgctcggacgaggag
ctgacgcgcttctaccacggcttcgtggccatgtgccggcaggtctgccgcctgccgccc
gcccccggagacgtgccgccccctctgtccccaccgcccctggccgtgtccccgtccctg
gccctgcgctgcctgcggcgcctggcgctgctgcgctgcctgcgggagcgcgtgctgccc
caccctgcgctgggggcgctgctggcgcggctgcccccgcccgggccgggctcgctgctg
ccgccctggtggcggccgggggtccacgacgcggcgctgctgcgggcggcggctcagcac
ggcctgcggggggcgctgctgcgcgggggcatcgccgccggacgggacatcatggacaaa
cgggacaagggcggcgggacgcgacggacagagaggaggaaccaagatggaggggacagc
gaggaggaggaggaggaggaggaggaaggcccggagccgctgggggccgaggatgaggag
gaggaggatgaggaggaggaggaggagggggagggggaggacgaggattcccctcccccc
tcgggcgagggcggggcccccagcgcgcccctcccccaggccacgcccaccgcgggggcg
gggccccagaacctcctctattggcccaaggagcgggcgctgattcgccgcctggacctg
atctgccgggccgtgctggcggcgggggaggggccgccccccccccaggacctggggggg
ctcccggagccggccccgcccccggccccgcccggccccgcccccccggccatggccccg
ccccgcggccgccaccccgacaaggagttcaccgtgcagatcaaggacgaggaagggctc
aaattgaccttccagaaacatcggctggggcccaacggggcccaacgggcgcccaaccct
cccaagaaaaacagcaagaaactggtggagctggagctgcgctgcctcgaggggctccgg
gaccccccgggagaccccgagggcgccatgggggcccctcccccccaccgcggagacaac
cccgaattcggggacccccggctgcacccgttcgtggagcagcgacgggaaaagtggcac
cggaaaaagttcatcccctcccccccctcaggtttggacctttccaagatggtggcgttg
atggggggcggagccagcggcacagggggcgtggcctctccctccttagccccgcccccg
cgcttccggccggaagcagaagaggaagcggaagcaggaagtgggtgctgccccctgctg
gccgaccccatgctgccgcccacttccgactcggattaa
DBGET
integrated database retrieval system
