Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460920
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Entry
135460920 CDS
T09958
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135460920
Transcription factors [BR:
zle03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135460920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
135460920
NCBI-ProteinID:
XP_064593960
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MDGRPGPRPTPEGRRERSRDAARCRRSREAEVFGQLALALPFARGVSAHLDKASIMRLTI
SYLRVQRLLAAGAWAAAAEAVDGCYLQALSGFVMVLSEGGDMIYLSENVSRLLGLSQLEL
IGHSVFDFVHPCDHEELHDVLGPRQGGPRRRGERSGRSFSLRMKSTLSGRGRCLNLKAAS
WKVLHCAGHMRTYAGGAGAAEPPLRCLVLICEAIAHPGAIEAPLGSGTVLTRHSMDMKFT
YCDDRIGEVAGYHPEELLGCSLYEFVHALDSNTLSRSVHTLLSKGQAVTSQYRFLAKRGG
FLWAQTQATVMGGGRAAPEGIVCLHFVLSRVEQRGLVLSLEQTQRRELGRGRRPPAPAPN
PPDTVLDLSL
NT seq
1111 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcggcccgggccgaggccgacccccgagggccgccgggagcgctcccgggac
gccgcccggtgccggcgcagccgcgaggccgaggtgttcgggcagctggcgctggcgctg
cccttcgcccgcggcgtcagcgcccacctggacaaggcgtccatcatgcggctgaccatc
agctacctgcgcgtgcagcgcctgctggccgccggcgcgtgggcggcggcggccgaggcc
gtggacggctgctacctgcaggcgctgagcggcttcgtgatggtgctgagcgagggcggg
gacatgatttacctgtccgagaacgtcagccgcctgctggggctcagccagctggagctg
atcggacactccgtgttcgacttcgttcacccctgcgaccacgaggagctgcacgacgtg
ctgggcccgcggcaggggggtccccggcggcggggggagcgctcgggccgcagtttctcg
ctgcgcatgaagagcaccctgagcggccgcgggcgctgcctcaacctgaaagcggcgtcc
tggaaggtgctgcactgcgccgggcacatgcgcacgtacgcggggggcgcgggggccgcg
gagccgccgctgcggtgcctggtgctgatctgcgaggccatcgcgcaccccggggccatc
gaggccccgctgggctcgggcaccgtgctcacccgccactccatggacatgaagttcacc
tactgcgacgatcggatcggggaggtggccgggtaccaccccgaggagctcctgggctgt
tccctgtacgagttcgtgcacgcgctcgactccaacaccctgagccgcagcgtccacacc
ctgctcagcaagggccaggctgtcaccagccagtaccggttcctggccaagcgtgggggg
ttcctgtgggcgcagacccaggccaccgtcatgggcggggggcgagcggcgcccgagggc
atcgtgtgcctgcacttcgtgctcagccgcgtggagcagcgcgggctcgttctgtccctg
gagcaaacgcagcgccgcgaattggggagggggcggcgccccccggcccccgcccccaac
ccgccggacaccgtgctggacctgagcctgg
DBGET
integrated database retrieval system
