Zonotrichia leucophrys gambelii (white-crowned sparrow): 135461011
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Entry
135461011 CDS
T09958
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1
KO
K18735
protein SMG9
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135461011 (SMG9)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
135461011 (SMG9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
135461011
NCBI-ProteinID:
XP_064594062
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MSDSGQSPAPGARRRCWNREKEPEGGGERREMGEEPAGTLQKTPIILAKPPAERQQPPPA
APKAGPAQAPPPPAPAPPIVLMKARGEEGRGGGGASAAPGEGPQQAPPTEREGPRPTQPV
YQLHSRGLAPPAALDPAQAQARLAAPEKMKSSIKLVDEQMNWCDSALEFLLEQTDVLVVG
ALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFITQERVLFL
DTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDL
GLYRFLQTAEMVKPPTPSPSHDSSGAGPEEPSEYYPHLVFVQTRAPPECFSPRRLAQMQR
VLGRLMAHSRLKYRGSLSMRELLPGAPPGAEPEVNLFLLPPLEEEPEDALPRGGGGALFP
ALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEY
GRLLG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactccgggcagagccccgcccccggcgcgcggcgccgctgctggaaccgagag
aaggaaccggagggaggcggagagaggagggagatgggggaggagccagcggggacccta
cagaagacgccaatcatcctggccaagccccctgcagaacggcagcagccgcctccagcc
gccccaaaggcggggccagcgcaagccccgccccctcccgcgccggccccgcccatcgtg
ctgatgaaagcgcggggggaggaggggcggggagggggcggagcctcggcagcaccaggg
gagggcccacagcaagccccgcccaccgagagggaggggccacgccccacccagcctgtc
tatcaactgcacagccggggattggccccgcccgccgcgctggaccctgcccaggcccag
gcccggctggcggcgcccgagaagatgaaaagcagcatcaaactggtggacgagcaaatg
aactggtgcgacagcgccctcgagttcctgctggagcagacggacgtgctggtggtggga
gcgctggggctgcagggaaccgggaaatccacggtgatgtcactgctggccgggaaccag
cccgaggaggacccgcgctccttcgtgttccggccgcagccgccggagctccgcgagagg
ggcggggcccagaccgggggcatcgacctgttcatcacccaggagcgcgtcctgttcttg
gacacgcagcccatcctaagccccgcccacctggatcacctgatcaacaacgaccggaag
ctcccgcccgagttcgcgctgccccacgcctacgtggaaacccagtcgctgcagatcgct
gctttcctgttcaccgtgtgccacgtggtgctgctggtgcaggattggttcactgacctg
gggctctacaggttcctgcagacggccgagatggtgaagccgccgacgccgtccccgagc
cacgactcgagcggggccgggcccgaggagccctcggagtattacccgcacctggtgttc
gtgcagacccgcgctccccccgagtgcttctccccgcgccgcctggcgcagatgcagcgc
gtgctcggccgcctgatggcgcactccaggctcaaatatcggggctcgctgtccatgcgg
gagctgctccccggtgccccccccggggccgagcccgaggtcaatctgttcctgctgccc
cccctggaggaggagcccgaggacgccctgccccgaggtgggggaggggcgctgttcccc
gccctgcccccattccggggtcggggggggctcggggggctcctggcccggctcaggggt
cgggtcctggcagctgcacgttcccagttatcgcacagcctgctgaccgagaggaactgg
ttccattacgccgctcgcatctgggatggggtgaagaaatcctcagccctggccgagtac
ggccgcttactgggctga
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