Zonotrichia leucophrys gambelii (white-crowned sparrow): 135461052
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Entry
135461052 CDS
T09958
Symbol
CIC
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135461052 (CIC)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135461052 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
DUF4537
Motif
Other DBs
NCBI-GeneID:
135461052
NCBI-ProteinID:
XP_064594104
LinkDB
All DBs
Position
Unknown
AA seq
1930 aa
AA seq
DB search
MVTPRHSADEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGAPGGLPAPPGSLPTPEPP
ELEAAFRRLRCQRVLARRDGVFRPAVVKQLRRGGHELGVQFAGDRAVTFLEGGFLLGDPP
AVVLDATPPAGALGVGTAVCARLDPAETLYRPGTVVEVSAKPPSYRVRFAPPPPAPPVWV
PRSGLRLLRPPWPPELHNDDEEDDEGAPRQPEDAEVSKLSAAPQIQQQQQQQQQQQQPPT
PQRAAGPPTQPGGTPQPKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCTKESQRRGFCS
RHLSMRTKELEGLPDPRPGPPGPPSQRGGSADFEWGGDETSRESEGDARARPGPPNPDLS
RFEFDECEAAVMLVSLGSSRSGTPSFSPASTQSPFSPTPSPSPSPLFGFRPANFSPVTAS
PRARGRHLSSGTPRPGEGLSPPPPPPPPPPPPPPPPPRPRPPSGVPPVFQPGLPFPVPLS
PGKRKAETAAIGEGGDGGGPGAAGGGAGGGAMFRALSPLFAPRSPAGLTADPGPGARRVP
PVPRGSPVIVRNPEVPLPEPPLPPRPRPLGPPPPQKAPPHHPPPPPLAAPVPINAGRLRP
SAGSAPPPPERGAPPAPFGAPPPPLQPVPFHPSPAALLPLLVPGEFGSPPQQQGPPRKEI
VMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPSQPDAPPHPPAGLQPVSHLSHLGHPGHPP
AAAPGKEPPESLAVAPEPGGRGQEPGRCGGATRPPSPPPAAPPAPPPAATAPPTEEEPPG
GGTRPDSETESDHDDAFLSSIVAPELPLPLGPGKRRTQSLSALPKEGDKDGRSPSKREKD
HIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPREKQQYHDLAFQVKE
AHFKAHPDWKWCNKDRKKSSSDGGRGPGGVPKEPRERSASESGPPAPPPGGADPSPPEAK
GAGPAEPRGGAGGGGVAGGGAGPPRPRAFSHSGVGGGAEPRGAPLSELSQLCSGPAPFAA
TPKAGGGAVPSFPPLPPARSGAPPRPPRALPRPPRAQSEEMTSDEERMVICEEEGDDDVI
DDGFAPPPPDIDLKCKERVSDSESEGEGQQAPPRRPFPPGPPRPPPELEPPPGPPEPPPG
PAPTPYKATPLPPRGPAPLPPRRKRAESAEGGMGGASVGGGTSGGGGAAGGGSSAPPPPL
RPGPAPSKAPLGGAGAGPGGGVVANLVLGGGAGAGPGPPPPPSLALLPSPHPPIPPRPAP
SAPPAPPNPPQGPPNPPLHFALPPPQNGKAPPTSGGGAGGSAPKAQPSPPGQAPPPSPLL
PGKVLVPVAPPGPALTPFGTPGAAPPPGKIIQLSPVPLVPPPGSPVGVGVGGGAGAGPAP
PPKVLLPPARIAYVHPAPPPPAQAPPPVLGFTALLQGQGSLLGPAPVGVSALPPPQLPPP
SSGGPVLAAIYPGGPAPGPAPAPGLVYSVAGSAPPGPAPPILPKAGPAPTLAAAAAPPFP
PRAPRPSPKPPQKVKAALATIPVGGGEAPPPPRPPPDPPRPPPAEPAPPPGPAPCSSPPP
APPSPAPPPAGDWDAAAPPPAEAPPPCPSPRAEAWSQREPVGEGPPSPAPPDAAERWAPP
STEATPSAGTSGSAPSPPGPAPEGPPRAAPPPPAPPPAEGGAKKAKLRPPPLKKTFDSVD
RVLSEVDFEERFAELPEFRPEEVLPSPTLQALATSPRTILGSYRKKRKNSTDLDPIGDDP
SSPKRKLRRRSSCGSEPSTPKSAKGGEGEGPGEIFTFDRQGGEGEDVLGELEYDKVPFSS
LRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARFSDIFPTKLCLQLKIREVRQKIMQAA
TPTEPAPPTEPDGAAPSASEATPPQPPPPPPPPPPPQTTPLSASSNPAPSASDPAPSTEA
TPPSPPSAVR
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggtgacccccaggcactcggccgatgagggcggcggaggcggaggaggaggaggagga
ggaggaggaggaggaggcggaggaggaggaggaggaggaggaggaggcggaggaggaaat
gggggcgctcccgggggtctccccgctccccccggttctctcccaaccccggaacccccc
gagctggaagcggcgttccggcgtttgcgttgccagcgggtgctggctcggcgcgacggc
gttttccgcccggccgtggtgaagcagctgcggcgcggcggccacgagctgggcgtgcag
ttcgccggcgaccgcgccgtcaccttcctggagggcggcttcctgctcggagaccccccg
gccgtggtgttggacgcgaccccaccggccggagcgctgggagtgggcacggccgtgtgc
gcccgcctggacccggccgagacgctctaccggccgggcaccgtggtggaggtgagcgcc
aagccgccctcgtaccgggtgcgcttcgcgccgccgccgcccgcgccgcccgtgtgggtg
ccgcgctcagggttgaggttgctgagacccccgtggccccccgagctccacaacgacgat
gaggaggatgatgaaggcgccccgcggcaaccggaggacgcggaggtttccaagctgagc
gctgcgccccaaatacaacaacaacaacaacagcaacaacaacaacagcagccccccacc
cctcagcgggcagcgggacccccgacccaacccggcgggaccccccagcccaagtacaag
aagggcgacgtggtttgcacgcccaacggcatccgcaagaagttcaacgggaagcaatgg
cggcgcctgtgctcccgcgacggctgcaccaaggagtcgcagcgccgcggcttctgctcc
cgacacctctccatgcgcaccaaggagctcgaggggctgcccgacccccgcccgggcccg
ccgggacccccgagccaacgcggcggcagcgctgatttcgaatggggcggcgacgaaacg
tcccgggagagcgaaggggacgctcgggctcgcccggggccgcccaacccggacctgtcg
cgcttcgagttcgacgagtgcgaggccgccgtgatgctcgtgtcgctgggctcgtcgcgc
tcgggcacgccgagcttctcgccggcctccacgcagtccccgttctcgcccacgccgtcg
ccgtcgccgtcgccgctcttcgggttccgccccgccaatttcagcccggtcacggcctcg
cctcgggcccgtgggcgccacctgagctcgggcaccccccggcctggggaggggttgagc
cccccgccccctccccccccaccgccgccccctcctcctcctcctcctcctcggccccgc
ccaccctcgggggtcccgcccgttttccagcccggtttgccgttcccggtgccgctgagc
cccggcaagcgcaaagcggagacagcggccataggggaggggggcgatgggggcggtccc
ggtgcggcggggggcggggcggggggcggggcgatgttccgcgcgctctcgccgttattc
gcgccccgctcccccgccgggctcacggccgaccccggccccggtgcccgccgggtccct
ccggtaccgcggggctcccccgtcatcgtccgcaaccccgaggtgccgctcccggagccg
cccctccctccgcggccccgccccctggggccgccccctccccaaaaagcgccgccccac
caccccccgcctccccctttggccgcgccggtgccaatcaacgccggcaggctccgcccc
tctgccggctcggccccgccccctcccgagcgcggcgccccccccgcgccgttcggggcg
cccccccccccgctgcagcccgtgcccttccacccctcccccgccgcgctgctgccgctg
ctcgtgcccggagagttcgggagccccccccagcagcagggacccccccgcaaggagatc
gtcatgggccggcccggcacagtgtggaccaacgtggagccgcgttcggtgcccgtgttc
ccctggcactcgctggttcccttcctggcccccagccagcccgacgcccccccgcacccc
ccggccgggctgcagcccgtgagccacctgagccacctggggcaccccgggcacccgccc
gcggctgcgcccggaaaagagccgcccgagtcgctggcggtggcgcccgagccggggggg
cggggccaggagcccgggcgctgcgggggggccacgcgcccgcccagccccccccccgcc
gcccccccggccccgccccccgcggccacggccccgcccaccgaggaggaaccgcccggg
gggggcacccggcccgacagcgagaccgagagcgaccacgatgacgcgttcctgtcgtcc
atcgtggccccggagctgccgctgccgctggggccgggcaagcgccgcacgcagtcgctg
agcgcgctgcccaaggagggcgacaaggacggccgcagccccagcaagcgggagaaggac
cacatccggcgtcccatgaacgccttcatgatcttcagcaagcggcaccgggcgctggtg
caccagcggcacccgaaccaggacaaccgcacggtcagcaagatcctgggcgagtggtgg
tacgcgctggggcccagggagaagcagcagtaccacgacctggccttccaggtgaaggag
gctcacttcaaagcgcacccggactggaaatggtgcaacaaagaccgcaagaaatccagc
tcggacggggggaggggcccggggggggtccccaaagagccccgagaacgcagcgcctcc
gagagcggccccccggccccgcccccaggtggcgccgacccctccccccccgaggccaag
ggggcggggcccgcggagccgaggggcggggccggaggagggggcgtggccggaggaggg
gcggggccgccccgcccccgcgccttctcccacagcggcgtggggggaggggccgagccc
cggggggcgcccctgagcgagctcagccagctctgttcaggccccgcccccttcgccgcc
acgcccaaggcagggggcggggccgtgccctcgttcccgcccctcccccccgcgcgctcg
ggggccccgccccgccccccccgggccctgccccgccccccccgcgcgcagagcgaggag
atgacgagcgacgaggagcggatggtgatctgcgaggaggagggcgacgatgacgtcatc
gacgatggtttcgcccctcccccgcccgacatcgacctcaagtgcaaagagagagtgagc
gacagcgagagcgagggggaggggcagcaggccccgccccgccgcccgttcccgccgggg
ccgccccgcccccccccggagctggagccgcccccgggcccccccgagccccccccgggc
cccgcccccaccccttacaaagccacgcccctccccccgcgcggccccgcccctctcccc
ccacgccgcaaacgggccgagagcgccgagggggggatgggcggggcctcggtggggggc
gggacctcgggagggggcggggccgcagggggaggcagctccgcccctccccccccgctg
cgccccggccccgcccccagcaaggccccgctggggggggcgggggcggggcctggggga
ggggtcgtggccaatctggtgctggggggaggggcgggggcggggccgggcccccctccc
cccccttcactggcgctgctcccctccccccacccgcccatccccccccgccccgccccc
agcgcccccccggccccgcccaaccccccccagggcccccccaacccccccctgcacttc
gccctgcccccgccccagaacggaaaggccccgcccacttccgggggaggcgccggaggc
tccgcccccaaagcccagccctcccccccgggccaggccccgcccccttccccgctactt
ccgggaaaggttttggttccggtggccccgcccggccccgccctgacgcccttcgggacc
cccggagcggccccgccccctggcaagatcatccagctcagccccgtgcccctggtgccc
cccccgggcagccccgtgggcgtgggcgtggggggcggggccggcgctggccccgcccct
ccccccaaggtgctgctgccccccgcccgcatcgcctacgtgcacccggccccgcccccg
cccgcgcaggccccgccccccgtgctggggttcacggccctgctgcaggggcagggctcc
ctgctcggccccgcccccgtgggggtctcggccctgccccccccccagctgccccccccc
agctcggggggtcccgtcctggccgccatttacccgggaggccccgcccccggccccgcc
cctgcgcccggattggtctacagtgtggctggctccgcccccccgggcccggccccgccc
atcctgcccaaggccggccccgcccccaccctggcggctgcagccgccccgcccttcccc
ccccgcgccccccgcccctcccccaagcccccccagaaggtcaaggccgccctggccacg
atcccggtggggggaggggaggccccgcccccgccccgccccccgccggacccgccccgc
ccccctccggcagagcccgcccctccccccggccccgccccctgctcctcccctcccccc
gccccgccctcccccgctcctccccccgccggcgactgggacgctgcggccccgcccccc
gccgaggccccgcccccctgcccctccccccgcgccgaggcctggagccagcgggagccg
gtgggggaggggccgccgagccccgccccccccgacgcggccgagcgctgggccccgccc
tccaccgaggccacgccctccgccggcacctcaggctccgccccatcccctcctggcccc
gcccccgaggggcctccccgcgcggccccgccccctccggccccgcctcctgccgagggt
ggggccaagaaggcaaagctccgccccccgcccctgaaaaaaactttcgactctgtggac
agggtcctttcggaggtggatttcgaggagcgcttcgcggagctgcccgagttccggccc
gaggaggttctcccctcccccaccctgcaggccttggccacctccccccgcaccatcctg
ggcagttaccgcaaaaagcgcaagaactccacagacctggaccccattggtgacgacccc
tcctcgcccaagcggaagctgcggcgccgctccagctgcggctccgagccctcgaccccc
aagagcgccaagggcggggagggggaggggccgggcgagatcttcaccttcgaccgacaa
ggcggggagggcgaggacgtgctgggcgagctcgagtacgacaaggtgccgttctcgtcc
ctgcggcgaacgctggaccagcgccgcgccctcgtcatgcagctcttccaggagcacggc
ttcttcccctcggcccaggccacggccgcgttccaggctcgtttctccgacattttcccc
accaagctctgcctgcagctcaagatccgcgaggttcgccagaagatcatgcaggcggcc
acgcccaccgagccggccccgcccaccgagcccgacggcgccgccccttccgccagcgag
gccacgccccctcagcccccaccaccgccccctcctcctcctccgcctcaaaccacgccc
ctttcggcctcctccaaccccgccccctccgcgtctgaccccgccccctcaaccgaggcc
acgcccccctcgcctccctcggccgtgcgctga
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