Zonotrichia leucophrys gambelii (white-crowned sparrow): 135461171
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Entry
135461171 CDS
T09958
Name
(RefSeq) uncharacterized protein LOC135461171 isoform X1
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00240
Pyrimidine metabolism
zle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
135461171
Enzymes [BR:
zle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
135461171
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
135461171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
135461171
NCBI-ProteinID:
XP_064594229
LinkDB
All DBs
Position
1A:complement(13487963..13516615)
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AA seq
705 aa
AA seq
DB search
MHKMIRKITLSLGRQVSSMAHGATQVRRLLHGGYVRIHPSVQEALVEGRPVVALESTIIT
HGMAYPLNLSMARKVEEIVRTNGAVPATVGILRGQIHVGLTDEELEFLASSKNAVKVSRR
DFPFVLSQGLSGGTTVSGTMIVAHKAGIPVFVSGGIGGVHRDGENTLDVSADLTELGRTP
VAVVSAGAKSILDIGRTLEYLETQGVCVAAFGESREFPAFFSRQSGFQAPYHVQDEEEAA
KLIDCALGLGLGSGVLIAVPCPQERAAQGQVIEEAIQQALSQARSKGITGKDVTPFLLQK
LIELTDGKSLDSNLALIQNNARVGSCIAVALSKLQKARRKRSQPGQKDMSAPQPVVIGGI
NVDFIAKAQNPEILGGGQTNAGRVRRAFGGVGRNLADCLSRLGQAPLLLSAVGKDEHLES
VLHYCHHMDMSGVLRLEGESTATYCAVISSAGELSLGLGDMDIHQQITEQYVSQFKEKLC
QAPLVCIDGNVPLSTIQYVCQVAREHQLAVCYEPTDENKASKPFLSDSWKALTYISPNLQ
ELRAINRTLGNPVPAELPSRLEDAVQAAAALACPLLSHLQCVVVTLGAHGVLLCGRSLAG
SISLHPGAHRQAAAARLCAAHYPAIPISREEIVNVSGAGDSLMAGILAGVLAKHDTGTCV
RMGLLAASLSLRSYEPISPEISTSSVSQEQVKSRSWPEAKVWKMD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagatgattaggaagataaccctcagcctgggaagacaggtgtcctccatggca
catggggccacccaggtgagaagacttctgcatggtggttatgtcaggatccatccctct
gtgcaggaggctctggtggagggcagacccgtggtagccttggaaagcaccatcattaca
catggcatggcctatcccctgaatctgagcatggccagaaaggtggaagaaattgtaaga
acaaatggagcagtgccagccactgtaggtattttaaggggccagatccatgtgggactc
acagatgaggagctggagttcctggcaagcagtaaaaatgcagttaaagtgtctcgcagg
gattttcctttcgtcctcagccagggcttgtctggtggcaccaccgtgtctggaacaatg
atcgtggcacacaaagcaggaatccctgtgtttgtctcaggtggcattggaggtgtccat
cgggatggggagaacactctggatgtgagtgctgacttgacagagctcggacgaacaccg
gtggctgttgtatctgcaggagccaagtctatcctggatattggccggacactggaatat
ctggagacccagggtgtgtgtgtggctgcctttggagaatcaagggagttcccagccttc
ttctcccgccagagtggcttccaagcaccataccatgtccaggatgaagaggaggcagct
aaactcattgactgtgctctggggctggggctgggcagtggggtgctgatagcagtgccc
tgtccccaggagcgagctgcccagggccaggtcattgaagaggccatccagcaagctctc
agccaagccaggtccaaaggaatcacaggcaaagatgtgaccccctttttgttacagaag
ctcatagagttaactgatgggaaatcgttggactctaacctcgcactgatccagaacaat
gccagagtgggcagctgcattgcagtggccctcagcaaactgcagaaagccaggaggaag
aggagccagcctgggcaaaaggacatgagtgcaccccaaccagtggtgattggcggtatc
aacgttgactttatagccaaggcacagaaccctgagatcctgggcggtgggcaaacaaat
gctggaagagtgagacgagcctttggcggtgttggaaggaacttggcagactgtttaagc
cgtcttggacaagctcctctccttttatcagccgtggggaaggatgagcatttagagtct
gtcctgcactactgccaccacatggacatgagcggcgtccttcggctggagggggagagc
acagccacttactgtgccgtcatcagcagtgctggggagctcagccttggcttgggagac
atggacatccaccagcagataacggagcaatatgtgtcccagttcaaggagaagctgtgt
caggccccacttgtttgcattgatggaaatgtgcctctctccactattcagtacgtctgc
caagtagccagagagcaccagctagcagtgtgctatgagccaacagatgagaacaaggcc
tctaagccattcctctcagacagctggaaagcactcacatacatttcccccaacctgcaa
gagctgagagcaataaatcggaccctcgggaaccctgtgccagcagagctgccatccagg
ttggaggatgctgtccaggctgcagcggccctggcctgccctttgctgtcccacctgcag
tgtgtggtggtgaccctcggcgctcacggcgtcctcctgtgcggcaggagcctggcaggg
agcatctcccttcatccaggagctcacagacaggctgctgctgccaggctctgtgctgcc
cactaccccgccatccccatcagcagggaggagattgtcaacgtctcaggagctggtgac
agcttaatggcaggaatccttgcaggggtgcttgctaaacacgacacaggcacgtgtgtg
cggatgggtctgctggctgccagcttgtctctccgttcctatgagcccatttccccagaa
atcagcacttccagtgtcagccaggagcaagtcaagagcaggagctggccagaggcaaag
gtatggaagatggactag
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