Zea mays (maize): 100126928
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Entry
100126928 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100126928
KO
K10779
transcriptional regulator ATRX
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
100126928
03036 Chromosome and associated proteins [BR:
zma03036
]
100126928
Transcription factors [BR:
zma03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100126928
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100126928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
KARI_C
zf-4CXXC_R1
Motif
Other DBs
NCBI-GeneID:
100126928
NCBI-ProteinID:
NP_001354356
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All DBs
Position
1:complement(240690331..240723650)
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AA seq
1484 aa
AA seq
DB search
MNSMDKDGILSDENLAKMESAQPNGQRVDIIIIDSQSDENKIGVETSIRESSLKEHKEPP
RTTVDNNVNEETSTTDDDSEANSYEFFVRESDNEQASASEEGTEVPLTEEEVEELVVEFL
EVESKAAQAQESLEKESLDKIETEVRLELSERLQGDELESAVSTEMEQFQMQWENELDDL
EIRSSILLEQLDAAGIELPRLYKTIESQVPNVCQTEAWKSRTHWAGSQVPEEATQSIKKA
DEYLQSCRPVRRKHGRLLEEGASGFLAGKVPVGDDDSVKCHEKSWSSFNELIKSKESAEN
TFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEISEVDGVFDDIKGVDEVELSEEQRRK
YRKVREEDDAKIMKCLQRRLKGKRMRDWCKENFGLVSSCDEKPPLPENGVLGAKSDCPSS
KKLKTDENKVSIEILKHTCEDDDNEKRLKTVIVESDDDMQIDSKQALQKDGEGSSTEFEK
VVDIIDLDLFPSPKLPNKSLHKTFKCTICSEMLNASDVHRHPVLDVVVCGSCRFLVIEKN
RLEDPVSGSYCTWCAQSELIQSCSSCKLLFCTNCLSRNLGEECLSEAKATGWQCCCCVPS
QLELLISECDKALSGVESSDSETSNAELSGSENNGPVSKQKMKKSIRRIMDDTELGEETK
RKIAMEKARQDHLKSMQEQSATKLRSKNVGNPFETPLEICLQDAGDGHVVNLAREEDEEP
VRIPSSMSSKLKPHQVEGIRFMWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQVITFL
YTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTK
WRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEITYALQCGPDILVCDEAHMIKNRRADIT
QALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSTHEFRNRFQNPIENGQHTNS
TSDDVKIMNQRSHILFEQLKGFVQRKSMNVVKNDLPPKKVFVITVKLSQLQRKLYKRFLD
VHGFSSSGYSEKSHRSFFAKYQTLSQVWNHPGLLQMAKEQRGNLRREDAVENFMMDESSS
DDNVENYLPNGEKQKDKADQQSKKSNIIMNEESNWWEELLDENTYMKADYSGKMTLLLDI
LSKSSELGDKVLVFSQSLTTLDLVEFYLAKLQINGKEGKHWKRGKDWYRLDGSTPSSDRQ
NLVEMFNDLENTRVKCTLISTRAGSLGINLHAANRVVLLDGSWNPTHDLQAIYRVWRYGQ
TKPVYAYRLMAHQTMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEFGEEELM
EQNENGSTMIEKPSTSNTIKTSVPVPVDSLMLSLLSEQTRWISGYHEHEALLQENEEEKL
TKEEQDLALSEWESLRKAASDPERKSSMSAVPTYPNPVRPLKPASRSRQLQQPKANSNNQ
KKCTNLTHLLTLRSHGTKAGCTTTCNECGQEISWETLNRDGRSR
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtatggataaggatgggatattgtctgatgaaaacttggcaaagatggaatct
gctcaaccaaacggacagcgggtagatataataatcattgactctcaaagtgatgaaaat
aaaattggtgtggaaactagcataagagagagttccttgaaggagcataaggagcctcca
cgcacaacagtggacaacaatgtgaatgaagaaacatccactactgatgatgattcagag
gccaattcatacgagttctttgttcgagaatcagataatgaacaagcttcagcatctgag
gaaggcactgaggtacctctgactgaggaagaagttgaagaattggttgttgaattcctt
gaagtcgagagcaaagcagctcaagcacaagagtcacttgaaaaagagtcactggacaaa
attgaaactgaagtaagattggagttatctgagaggcttcaaggggatgagttagaatca
gctgtgtcaactgagatggagcaattccagatgcaatgggaaaatgaacttgatgatcta
gagatccgtagttctattcttctggaacaacttgatgctgctggaattgaacttcccaga
ctctataagacaattgaaagtcaagttccaaatgtttgtcaaactgaagcatggaagagc
aggacacattgggctggttctcaagtgcctgaagaagctacccaatccattaaaaaggcc
gatgaatacctccagtcttgcagacctgtacggagaaaacatgggaggttgctggaggaa
ggtgctagtggttttcttgctgggaaagttcctgttggggatgatgattctgttaagtgt
catgagaaaagttggagctctttcaatgaacttattaaatctaaggagagtgctgagaat
acatttggtagcagtaactgggcatcagtttatcttgcaagtaccccccaggaagcagcc
gcattaggtctccagtttcctggagttgatgaggtagaggagatatctgaagttgatggt
gtttttgatgatataaaaggtgtagatgaagtagagctttctgaggaacagagaaggaaa
tacagaaaggtaagggaagaggatgacgcaaaaataatgaagtgcctgcagcgccgtttg
aaaggaaaaaggatgagagactggtgtaaggagaactttggtttggtctcatcatgtgac
gagaagcctcctctaccagaaaatggcgttttaggtgctaaaagtgactgtccttcatct
aaaaaactcaaaactgatgaaaacaaagtttctattgagatattgaagcatacatgtgaa
gatgatgataatgagaagagattgaaaactgtgatagttgaaagcgatgatgatatgcag
atagatagcaaacaagctttacaaaaggatggtgaaggtagttcaacagaatttgaaaaa
gtggttgatatcattgatcttgatctcttcccaagccctaagctccctaataaaagtttg
cataaaactttcaaatgtactatttgctctgaaatgctgaatgcctctgatgtgcatcgc
caccctgtcttggatgttgttgtttgtggatcatgcagatttcttgtgatagagaagaat
cgccttgaggatcctgtatctggtagttattgcacttggtgtgcacaaagtgaactgatt
caaagttgtagttcttgtaagcttcttttctgtacaaattgcttgtcaaggaatttaggt
gaagaatgcttatcagaagctaaagccactggttggcagtgttgctgctgtgtacccagt
caactagagctcttaatttctgaatgtgacaaggccctcagtggtgtggaatcttccgat
tcagagactagcaatgcagagctttctggatcagagaataatggtcctgttagcaagcaa
aaaatgaagaagagtattagaagaattatggatgatacagaacttggtgaagaaacaaag
cgtaaaattgcaatggagaaggcaaggcaagaccatttgaagtcaatgcaagagcaatct
gccaccaagttaaggagcaagaatgttggaaatccctttgaaactccactggaaatctgt
ttacaggatgctggggatggacatgtagtcaaccttgccagggaggaggatgaggaacct
gttaggattccaagcagcatgtcttctaaactgaagcctcatcaggttgaaggaataagg
tttatgtgggaaaatgttattcaatctgttaaaaaggtcaaatccagggataaaggtctt
gggtgcattttggcgcataacatgggccttgggaaaacttttcaggttattacattcctc
tacactgttatgagatgtgctcaattgggattgcgcacagcacttgttgtcacccctgtc
aatgttcttcataactggaggaaagagtttagcaagtggcgtccagcagagctgaagcct
cttcgcgtttttatgttggaagatgttgcaagggtgaaaaggccagatttactaactaaa
tggcgagtgaagggtggagtgcttctcattggttattcatcatttagaaatttatccctt
ggaaagcatgtgaaggacaaaaattctgcaaacgaaattacttatgctttgcagtgtggg
ccagatattcttgtatgtgatgaagcgcatatgataaaaaatagaagggctgacattaca
caggctctgaaacaagtaagaacacaaagaagaattgcgttaactggatctccattgcag
aataatctgatggaatattattgtatggttgattttgtcagggaaggttttcttgggagt
actcatgaattccgaaacaggttccagaaccccattgaaaatgggcaacacacgaattca
acatcagatgatgtgaagatcatgaaccaacgatcacacatcttgtttgaacaactgaaa
ggttttgtccagcgaaagagcatgaacgttgtgaagaatgatctaccaccaaagaaggtt
tttgttattactgtaaagctctcacagctgcagaggaagctatacaaaaggttcttggat
gttcatggtttctcaagtagtggttattcagaaaaatctcacaggtccttctttgccaag
taccagacattatcccaggtatggaatcatccggggctcctccagatggctaaagaacaa
agaggaaatttgcgtcgtgaagacgcggttgagaattttatgatggatgagagttcaagc
gatgataatgttgaaaattacttgcctaatggagagaagcaaaaggataaagctgatcag
cagtccaagaaaagcaacatcattatgaatgaggaaagtaactggtgggaggaactttta
gatgagaatacttatatgaaagcagattacagtggcaaaatgaccttgctccttgatatc
ctgtcaaaaagttctgaattaggcgacaaagtattagtgtttagccagagtttgaccact
ctggatttagtagagttttatctggcaaaattgcaaatcaatggaaaagaaggcaaacat
tggaagcgggggaaggattggtacaggcttgatgggagcactccatcttctgatcgtcag
aatcttgtggagatgtttaatgaccttgaaaacacaagagtgaaatgcacattgatatca
actcgtgctggatccctgggtatcaaccttcatgctgcaaatcgcgtggttcttcttgat
ggatcatggaatccaacacatgatctgcaagccatttatcgagtttggaggtatggccag
accaaacctgtatatgcctaccgcctaatggcacatcaaacaatggaagagaaaatatat
aagcgccaggtgacaaaggaaggccttgcagcaagggtggtggatagacagcaagtttca
agaaccatctccaaagaagagatgctgcatctttttgaatttggtgaagaggaattaatg
gaacagaacgagaatggttctactatgattgagaagccatccacttctaacactattaaa
acctctgtgcctgttcctgtcgacagtctcatgctgagcctgctcagtgagcaaactcgg
tggatttcaggttaccatgaacatgaagctctcctccaagaaaatgaagaagaaaagctt
acaaaggaggagcaggacctggctttgtccgaatgggagtcattgaggaaagctgcatct
gatcctgagagaaaatcaagcatgagcgcagttccaacatatcccaatcctgtgcggcca
cttaagcctgcttcaagaagccggcaactgcagcaacctaaggctaactcaaataaccaa
aagaagtgcaccaacttaacccacttgctgactctgagaagccatggcacaaaagcaggg
tgcacgacaacctgtaacgagtgcggccaggaaattagttgggagactctaaacagagat
ggtagatcgagatga
DBGET
integrated database retrieval system
